Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2471 ATGTTAAGGTCAACTATAGCAATGTTAACGCCAAACATTCCAGACAAAGATTTATATGTCGCAGACACTAATAATCAAAAGGGCAATTCACAACAACAACACGACCGAACGCAACTCCTTTTTTTCCTCTCTCTCTTGGCTGCCTCGCCAGCTGCGTTTTATATTGTACTGCTTTCTGGTTTCGGTTTTCTCGATTATTATCCACTGTTCTCCAATCGATCTAAGGAGACGGTAATTATCTTGTCACGATCGGTGAAACTAAGCCCACAGCTTCTGATACTTCCCCTGTTTCTGCATCTGCTTGTTGTGACCCCCCCCCCCCTTTTTTTTTCTGGTTTTCTTGGTCGGGTTGATGTTGACTTGTTGATTCATGGTGGTCATAAATCAATGGAGTCTCATGATGAGACAGGATGCCAGGCTCCAGAACGACCAATCCTTTGCATTAATAATTGTGGCTTCTTTGGAAGGGCTGCTACCATGAATATGTGTTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGAACAGGCCAAACTTGCTGCATCATCAGTTGAAAACATTGTGAATGGAAGCTCTAGCAGCAATGGAAAAGAGGTTGCAAGTGCAGTTGCCATGGATGTACAAGTTGGACCAGTGGAAGTCAAGCCAGTCTGTGCTGAGCTTTCTGGGGATTCGTCCTCTAGTGAGACATTGGAGGTGAAAGTCAAGACAGGTCCCAGCAGATGTGCCACTTGTCGGAAGCGAGTTGGATTAACTGGTTTCAGCTGTAAATGTGGGAACCTCTTTTGTGCAATGCACCACTATTCTGACAAACATGATTGCCCTTTTGATTATCGAACTGTTGGTCAGGATGCTATAGCTAAAGCCAACCCTGTAATTAAGGCTGAAAAGCTAGACAAAATCTAG 906 0.4404 MLRSTIAMLTPNIPDKDLYVADTNNQKGNSQQQHDRTQLLFFLSLLAASPAAFYIVLLSGFGFLDYYPLFSNRSKETVIILSRSVKLSPQLLILPLFLHLLVVTPPPLFFSGFLGRVDVDLLIHGGHKSMESHDETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQAKLAASSVENIVNGSSSSNGKEVASAVAMDVQVGPVEVKPVCAELSGDSSSSETLEVKVKTGPSRCATCRKRVGLTGFSCKCGNLFCAMHHYSDKHDCPFDYRTVGQDAIAKANPVIKAEKLDKI 301
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2471 301 Pfam AN1-like Zinc finger 242 278 IPR000058 GO:0008270
Dere01g2471 301 FunFam Zinc finger AN1-type containing 6 219 297 - -
Dere01g2471 301 Gene3D - 129 195 - -
Dere01g2471 301 Gene3D - 219 297 IPR035896 -
Dere01g2471 301 SUPERFAMILY AN1-like Zinc finger 232 296 IPR035896 -
Dere01g2471 301 Pfam A20-like zinc finger 145 168 IPR002653 GO:0003677|GO:0008270
Dere01g2471 301 PANTHER AN1-TYPE ZINC FINGER PROTEIN 142 301 - -
Dere01g2471 301 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 146 184 - -
Dere01g2471 301 ProSiteProfiles Zinc finger A20-type profile. 141 175 IPR002653 GO:0003677|GO:0008270
Dere01g2471 301 SMART A20_3 144 168 IPR002653 GO:0003677|GO:0008270
Dere01g2471 301 ProSiteProfiles Zinc finger AN1-type profile. 236 282 IPR000058 GO:0008270
Dere01g2471 301 SMART AN1_Zf_4 242 279 IPR000058 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g2471 Dere-ChrDere01 39322111 39325885 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2471 134 301 C2H2 Transcription Factor Family AT3G52800 43.787 6.51e-37 128