Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2422 ATGTCATTGTGCAGTAGCAGTAGCGGTAGCGTTGTCTGGGAAGATCTAACGGCGTCGGTGCCATGTTGTGGAGTAAACAAGAAGCTGCTTCATGGAATCACTGCCTCTGCTGAACCTGCTCGTCTCATGGCTCTTATGGGTCCTTCTGGCTCTGGCAAGACCACCCTTCTCCACTCTCTCTCTGGTCTGCTCTCTCTCTCTCTCTCTCTGTGGAGACTTCATGCAAATGTTACTGTGACCGGCAACATTCTGATCAATGGGAAGAAGAGGAACTTCTATCACAGAGAGATGTCTTATGTTGATCAAAAAGAGTATTTCTTGGGAACTTTGACAGTGAGAGAAACCCTCACATACTCTGCAAGAATGAGACTCAATTCAAAAATGACAAAAGAAGAGATAAGTAAGGTGGTCGAACACACCATAATGGAAATGGGTCTTGAAGAATGTGCCGATAATCAGATTGGGAATTGGCATTTGCGTGGAATCAGTACTGGTGAAAAGAGGAGACTGAGCATTGGCCTCGAGATTTTGGCACAACCTCATGTGTTATTTCTCGACGAACCCACCAGTGGACTAGATAGTGCTTCTGCATTCTACGTAATCCAAGCCCTAAGCCGCATAGCTCATGGAGGAGAAATAGTAATCTGTTCGGTTCACCAGCCGAGTAGTGAAAATTTTCATCTGTTTGATGATCTGCTCTTGCTCTCTGGTGGAGAAACTGTTTATTTCGGCGAAGCAAAGATGGCTTTAGAGTCAATATCATCAAATTCTGCAATGGACATGAAAACATCGGAGATTAGAATGACCCTCGTTGAGAGTTACAGAAGTTCGGAGATAATGGTCAACGCAAGAAGAAGGATTCAGAAACTGATATCTAACTCGCAGGAAGAACAAGTTATTGAGTCCAACATAAGAAGCAGTAGCAGCTGGTGGAAGCAACTCTGCACATTGACCCAGCGATCTTTCCTAAACATGACAAGGGACATGGGCTATTACTGGCTCAGGATCATGTTTTATATATTGGTATCAATCAGTGTTGGGACCCTATTTTATGATATTGGTACAAGCAACAATTCAATCTTGGCTAGAGGAATGTGTGTATCTTTCATCTATGGCTTCATGACTTGTTTATCTTGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTGTTCTACGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGTATTTGTACTGTCAAACATCCTGTCATCGTTCCCTTTCCTTGCTGTTCTATCTCTCTTATCTGGAATGATCATATACTACATGGTGCAGTTTCATCCGGGTTTAAGTCATTGTGCATTTTTCTGTATCAACTTGTTCTGCTGCCTATCGGTTGGTGAGAGCTGCATGATGGTTGTAGCTTCAGTGGTTCCCAATGTCCTGATGGGCATAGGAACAGGAGTTGGTATTATAATCTTTATGATGATGTCTTCCCAAATCGTCAGACCGCTACCAGACATTCCCAAGTTCTTTTGGCGCTACCCTATGTCCTACCTTAGTTTTGCTACTTGGGCAGTACAGGGACAGTACAAGAATGATATGTTGGGGCTTGAGTTTGATCCTCTTCTACCTGGTGACTCAAGAGTCAAGGGAGAGCAAATCCTAAAGTTGGTATTTGGGGTTCCATTAAACCATGACAAGTGGTGGGACTTAACAGCACTGATCACCTTATTATTACTTCACCGAATGCTTCTTTTCGTAGTACTTAAGTACAACAACAGACCCAAATTACCCTTGCTGTGGTTTCATACAAAGGTAACCCTACACCACTTTGCTGGAAGACTTTCACCAAGTACCAAGCCATCTATCTCTTCCAAGAGACAAGGTACTCCCCGTCCACTGTCTTCTCAAGAGGGTCTCATGTCACCGAGTTTCGCAATTTGA 1914 0.4347 MSLCSSSSGSVVWEDLTASVPCCGVNKKLLHGITASAEPARLMALMGPSGSGKTTLLHSLSGLLSLSLSLWRLHANVTVTGNILINGKKRNFYHREMSYVDQKEYFLGTLTVRETLTYSARMRLNSKMTKEEISKVVEHTIMEMGLEECADNQIGNWHLRGISTGEKRRLSIGLEILAQPHVLFLDEPTSGLDSASAFYVIQALSRIAHGGEIVICSVHQPSSENFHLFDDLLLLSGGETVYFGEAKMALESISSNSAMDMKTSEIRMTLVESYRSSEIMVNARRRIQKLISNSQEEQVIESNIRSSSSWWKQLCTLTQRSFLNMTRDMGYYWLRIMFYILVSISVGTLFYDIGTSNNSILARGMCVSFIYGFMTCLSCGGLPFFIEELKVFYGERSKGHYGEAVFVLSNILSSFPFLAVLSLLSGMIIYYMVQFHPGLSHCAFFCINLFCCLSVGESCMMVVASVVPNVLMGIGTGVGIIIFMMMSSQIVRPLPDIPKFFWRYPMSYLSFATWAVQGQYKNDMLGLEFDPLLPGDSRVKGEQILKLVFGVPLNHDKWWDLTALITLLLLHRMLLFVVLKYNNRPKLPLLWFHTKVTLHHFAGRLSPSTKPSISSKRQGTPRPLSSQEGLMSPSFAI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2422 637 SMART AAA_5 39 247 IPR003593 GO:0016887
Dere01g2422 637 MobiDBLite consensus disorder prediction 606 637 - -
Dere01g2422 637 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 254 586 - -
Dere01g2422 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 251 IPR027417 -
Dere01g2422 637 Pfam ABC-2 type transporter 313 518 IPR013525 GO:0016020|GO:0140359
Dere01g2422 637 Pfam ABC transporter 30 190 IPR003439 GO:0005524
Dere01g2422 637 Gene3D - 4 299 IPR027417 -
Dere01g2422 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 262 IPR003439 GO:0005524
Dere01g2422 637 MobiDBLite consensus disorder prediction 607 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2422 Dere-ChrDere01 38664365 38670434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2422 28 228 Calmodulin-binding Proteins AT2G36910 22.596 3.05e-08 55.1