Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2405 ATGGGGTCATTACCTTCTGTTTTTTATGAACATGGCAAGATTTTATTTGCCTTAGTCTTCATTGTTGTGATCCTGAACTCTATACCAATTAAGGCCAACCTATGCACCAATAACTCTGGATCCACCCCAATAGTTCCTCCCTACGAGATCCTTTCGTCATTGAAAACACTAGCTCTTGATGGTTACTTGAGCTTTGAGGAAAATGGACATGCAGCCAAGGACTTTGGTAACATATACCATTTTCCTCCTCTGGCAATTTTGCATCCAAAAACAGTTTCTGATATCTCACGCACAATAAATCATATTTTTGAAAAGGATTCTGGTTCAGAACTAAAGGTTGCAGCTAGAGGCCACGGTCACTCCCTTCAAGGTCAGGCACAAGCACACGAAGGCCTAGTTGTGAACATGGAATCACTGGAGGGACCAGAAATGACAGTTCACACTGGAGATTTTCCTTACGTGGATGTTTCAGGCGGTGAGTTGTGGATAAACATTCTGCATGAGACTCTTAAACATAGGTTGGCACCTAAATCTTGGACAGATTACCTTCATCTTACTGTTGGGGGAACTCTATCAAATGCTGGAATAAGCGGGCAAACCTTTCGGCATGGACCCCAGATCAGTAACATCTTCCAGCTGGAAGTAGTCACAGGAAAAGGAGAGGAGGTTACCTGCTCAGAGAAACAAAATGCCGACCTTTTTTATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATTACCAGGGCTAGAATTTCTCTTGAACCAGCACCAATAAAGGTGAAATGGATTAGAGTGCTGTACTCAGAATTCTCTGTATTTGCAAGGGATCAAGAGTACTTGATATCACTTGAAAATACATTTGATTATATTGAAGGGTTCGTAATCATAAACAGAACAGGCATCCTTAATAATTGGAGGTCATCCTTCAATCCCAAAGACCCACTTCAGGCCAGTCAATTTAATTCAGATGGGAGGACCTTCTACTGTCTTGAGGCGGCAAAATACTTCAACCCAGATGAAAGTGAAGCCATGAATCAGGTAGTTGACCAACTGCTGTTAGAACTGAGCTATATTCCATCCACACTCTTCCTGTCAGAAGTTTCTTGCGTGGATTTCCTGGACAGAGTGCATGTTTCTGAGATGAAGCTAAGAGCGAAAGGCTTGTGGGAAGTTCCCCATCCTTGGCTCAATCTTCTGATCCCAAGAAGCAGAATTCATGAGTTTGCGCATGAAGTGTTTGAAAAAATTCTTGTGGATACAAGCAATGGTCCCATACTCATATACCCCATCAACCAATCGAGGTGGAACAAAAGAACATCTTTGGTTACACCAGAGGAAGATGTTTTCTACCTGGTGGCATTTCTTTCATCCGCTGTACCATTTTCGACAGGGAAAGACAGCTTAGAATACATTATAAGCCAAAACGAAAGGATCCTACAATTCTGCGAGCGTGCTCAGCTAGGAGTGAAGCAATATCTTCCCCATTATAGCACACGTGAAGAATGGGAAGGCCACTTTGGGACAAGATGGGAAGTGATGATACGAAGAAAATCAACGTATGACCCATTGGCTATTCTTGCCCCTGGCCACAGAATATTTCAAAAGCCAATACCCGCCTCCTTTTGA 1629 0.4291 MGSLPSVFYEHGKILFALVFIVVILNSIPIKANLCTNNSGSTPIVPPYEILSSLKTLALDGYLSFEENGHAAKDFGNIYHFPPLAILHPKTVSDISRTINHIFEKDSGSELKVAARGHGHSLQGQAQAHEGLVVNMESLEGPEMTVHTGDFPYVDVSGGELWINILHETLKHRLAPKSWTDYLHLTVGGTLSNAGISGQTFRHGPQISNIFQLEVVTGKGEEVTCSEKQNADLFYGVLGGLGQFGIITRARISLEPAPIKVKWIRVLYSEFSVFARDQEYLISLENTFDYIEGFVIINRTGILNNWRSSFNPKDPLQASQFNSDGRTFYCLEAAKYFNPDESEAMNQVVDQLLLELSYIPSTLFLSEVSCVDFLDRVHVSEMKLRAKGLWEVPHPWLNLLIPRSRIHEFAHEVFEKILVDTSNGPILIYPINQSRWNKRTSLVTPEEDVFYLVAFLSSAVPFSTGKDSLEYIISQNERILQFCERAQLGVKQYLPHYSTREEWEGHFGTRWEVMIRRKSTYDPLAILAPGHRIFQKPIPASF 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2405 542 Pfam FAD binding domain 83 226 IPR006094 GO:0050660
Dere01g2405 542 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 83 118 IPR006093 GO:0016491
Dere01g2405 542 SUPERFAMILY FAD-binding/transporter-associated domain-like 70 256 IPR036318 GO:0050660
Dere01g2405 542 FunFam Cytokinin dehydrogenase 2 260 493 - -
Dere01g2405 542 ProSiteProfiles PCMH-type FAD-binding domain profile. 79 257 IPR016166 GO:0071949
Dere01g2405 542 PANTHER GULONOLACTONE OXIDASE 28 535 - -
Dere01g2405 542 Gene3D - 136 259 IPR016169 -
Dere01g2405 542 SUPERFAMILY FAD-linked oxidases, C-terminal domain 261 534 IPR016164 GO:0003824|GO:0050660
Dere01g2405 542 Gene3D - 260 493 IPR016170 -
Dere01g2405 542 Gene3D - 69 534 IPR016167 -
Dere01g2405 542 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 258 534 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2405 Dere-ChrDere01 38417590 38419742 Dispersed/Wgd