Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2402 ATGTCGTTTTTGACTCGTCTCAACGTCTTTGCAAGACCTCTCTGCTCGTCTCTCTTCTGCACTTCGCTCCAGAATGGAGGTAGAGATGCAATAACCAGGATTGGCATGAAAACCTGCTCTCTTTCTTCTGTAGTTGAAGCTTCAGATTTAGAATGTGACGAGATCCATGAGGATGACAAGGCAACAGAAAAAGACGCTGCACTACAGCTGGCTGTTTCACAACTTGCTAGTGAGTTTACCAGAGAGTCAATGTTATCTTTGCAAAAGTTTTTTGGTGCACGCCGTGCACCTGTGGTATCTACAGGTTCCTTGAAGTTGGACCTAGCTCTTGGAGTTGGAGGATTACCAAAGGGTAGAATTGTGGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTATCAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTTGATGTAGAAAATGCATTGGACCTTTCACTTGTGGAATCAATTGGTGTAAATACTGAAAACCTATTAGTCTCGCATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTTGATACGTTGACAAAAAGTGGAGCTGTAGATGTGATTGTGATAGACAGTGTTGCTGCCCTTGTCCCCAAATGTGAACTTGATCAATTGATTATTGGCACCAACCGAGATTTTCTGAAGCGATTAATGACCCAAGCACTGCGGAAAATTCATTATTCATTATCTCACTCCCAAACTCTTATAATTTTTATCAATCAGGTTAGATTAAGTCCAAAATCAGGCAAGGCATGTGGACCTGTGGAAGAGGTCACTTGTGGTGGAAATGCCTTGGGATTCTATGCAGCTGTTCGCTTGAAACTTATGAGAATGGGATTGCTTAAAACTGAGGATAAGGTAGAGGGACTTGCAATATGCGTGCAAGTGGTAAAAAATAAACTGGCACCAACAATGAAAAAGGCTGAATTGGGGATCAAGTTTGGAAGAGGCTTTTGCCTTGAAGCAGAGGTCTTAGAGTTGGCTTGTGAACATGGAGTGATTGTTAAACAACGAGGCAGCTACCTTATCGAAGGGATGACCTTTAATAGTAAACTTGCAGCTGAACGTTATTTGGCTGAAAGTGATGAGATTTTTGATAAATTGGTCATGGACTTGAGGAGAGTTTTGTTTTAA 1170 0.4162 MSFLTRLNVFARPLCSSLFCTSLQNGGRDAITRIGMKTCSLSSVVEASDLECDEIHEDDKATEKDAALQLAVSQLASEFTRESMLSLQKFFGARRAPVVSTGSLKLDLALGVGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKLGGYCAYLDVENALDLSLVESIGVNTENLLVSHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKCELDQLIIGTNRDFLKRLMTQALRKIHYSLSHSQTLIIFINQVRLSPKSGKACGPVEEVTCGGNALGFYAAVRLKLMRMGLLKTEDKVEGLAICVQVVKNKLAPTMKKAELGIKFGRGFCLEAEVLELACEHGVIVKQRGSYLIEGMTFNSKLAAERYLAESDEIFDKLVMDLRRVLF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2402 389 CDD RecA 97 331 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere01g2402 389 ProSiteProfiles RecA family profile 1. 95 254 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Dere01g2402 389 PANTHER RECA 46 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere01g2402 389 Pfam recA bacterial DNA recombination protein 67 330 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere01g2402 389 SMART AAA_5 117 243 IPR003593 GO:0016887
Dere01g2402 389 Gene3D - 94 386 IPR027417 -
Dere01g2402 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 329 IPR027417 -
Dere01g2402 389 ProSiteProfiles RecA family profile 2. 261 335 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Dere01g2402 389 PRINTS RecA protein signature 153 182 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere01g2402 389 PRINTS RecA protein signature 187 216 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere01g2402 389 PRINTS RecA protein signature 225 254 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere01g2402 389 PRINTS RecA protein signature 306 335 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere01g2402 389 PRINTS RecA protein signature 273 301 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2402 Dere-ChrDere01 38392089 38396841 Transposed