Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2380 ATGATCACCGCCACGTCAGCTCCTCGCTCCTTTTTATCTGCTAATTGCGATGCTATGACTGGAGTCGTTAAGATCGTCGCCTTCTCCAATGTTCTGAAGCTTAATCGGCCCCCACATGGTGCAGTTGCGATGGCTAACGACGACAAGCGGAAAGATTCCGATTTTTTATTGGATCAGAACGACGAGGATGCCCACGAAGACGCTGAATCTACCAAGCTTGACATTGAGAGTAGTAAGGACGGCGGAAGCGACGATGAGGGAAATCGTGAAGCTTTCTCTTCGCAGCAATGGCCCCAAAGTTACAAAGAGACTATTGATTCTTACACAATTGCTGCGTCACCGAATCTTGGAGCGGTTCTACGAACACCAAGTTTGATATATTCAAGCTTTGTCAATCGTTCAAAGAGTAGCTTAAGCCTAGATGGGAAGACTCCTTTATTATCTGATCAGGGAGACCAACTTCAAAAGGCGCAATCATCATGGTTTGAGAGACTTTCATTGCATCCGCAACTTACTGGAGAATTACCCATTGGCCAGGGATGTAGCCTCACTCAAACAATTTTCAATGGGATTAATGTGATGGCTGGAGTTGGCCTTCTATCCACACCTTATACTGTGAAGCAAGCTGGCTGGGCGAGTTTGGTGGTTCTGGTTCTTTTTGCAGTCATATGTTGTTATACAGCAACACTTATGAGATACTGCTTTGAAAGCAGAGAAGGTATCATGACATATCCAGATATCGGACAAGCAGCTTTTGGGAGAGCTGGCCGTCTTGTCATATCAATTATTTTGTACACTGAATTATATTCATACTGTGTGGAATTTATCATCTTGGAAGGAGATAACTTAACTAGGCTGTTTCCTGGAACTTCCTTGGATTGGGGCGGTTTACAGTTGGACTCTGTACACTTGTTTGCAATTTTGACTGCACTTGTTGTTCTCCCTACTGTTTGGTTGAAGGACCTTCGTTTAATCTCCTATCTCTCAGCTGGAGGGGTTATTGCAACATGTTTGATTGCCATCTGCGTGTTTCTTGTTGGGACAATAGATGGTGTTGGATTCCATCACACAGGTCATGTGGTGAATTGGAGTGGCATCCCATTTGCTATTGGCATCTATGGTTTCTGCTACTCAGGACATTCAGTTTTTCCAAATATTTACCAGTCTATGGCTGACAAAACAAAATTTACCACGGCAGTAATAATATGTTTTCTCTTGTGCGTTTTAATATATGGAAGCGTTGCAGTCCTGGGATATCTCATGTTTGGTGAAGCCACTTTGTCTCAGATAACATTGAATATGCCACCAAATTCCTTGGTTTCTAAAGTTGCATTGTGGACAACAGTAATTAACCCATTAACAAAATATGCCTTGCTGATGAACCCACTGGCAAGAAGTATAGAGGAGTTGCTACCTGATGGAATATCAGACAATTATTTGTGTTTTGTTCTACTTAGATCAGCACTTGTTGTTTCTACAGTTTGTTGTGCCCTTTTGATTCCTTTTTTTGGTCTAGTTATGGCTTTAATAGGTTCTGTGCTCAGTATCCTTGTGGCAGTCATTTTGCCAGCTTTATGTTTTCTGAAAATTATGCGGGGAAAAGCCACAAAAACACAGGTCGCTCTGAGTGTGATAATTGCTGTATGGGGAATCATTAGTGGAATCTTTGGCACATATTCTTCTGTGAAAAGAATTGCGGAGAATTACTGA 1710 0.4216 MITATSAPRSFLSANCDAMTGVVKIVAFSNVLKLNRPPHGAVAMANDDKRKDSDFLLDQNDEDAHEDAESTKLDIESSKDGGSDDEGNREAFSSQQWPQSYKETIDSYTIAASPNLGAVLRTPSLIYSSFVNRSKSSLSLDGKTPLLSDQGDQLQKAQSSWFERLSLHPQLTGELPIGQGCSLTQTIFNGINVMAGVGLLSTPYTVKQAGWASLVVLVLFAVICCYTATLMRYCFESREGIMTYPDIGQAAFGRAGRLVISIILYTELYSYCVEFIILEGDNLTRLFPGTSLDWGGLQLDSVHLFAILTALVVLPTVWLKDLRLISYLSAGGVIATCLIAICVFLVGTIDGVGFHHTGHVVNWSGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFTTAVIICFLLCVLIYGSVAVLGYLMFGEATLSQITLNMPPNSLVSKVALWTTVINPLTKYALLMNPLARSIEELLPDGISDNYLCFVLLRSALVVSTVCCALLIPFFGLVMALIGSVLSILVAVILPALCFLKIMRGKATKTQVALSVIIAVWGIISGIFGTYSSVKRIAENY 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2380 569 Gene3D Amino acid/polyamine transporter I 179 566 - -
Dere01g2380 569 Pfam Transmembrane amino acid transporter protein 182 561 IPR013057 -
Dere01g2380 569 PANTHER OS05G0424000 PROTEIN-RELATED 186 552 - -
Dere01g2380 569 MobiDBLite consensus disorder prediction 65 87 - -
Dere01g2380 569 MobiDBLite consensus disorder prediction 62 98 - -
Dere01g2380 569 FunFam Amino acid transporter AVT1A 179 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2380 Dere-ChrDere01 38128059 38138833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2380 46 504 Amino Acid or Auxin Permease AAAP Family AT2G41190 64.496 0.0 606