Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2369 ATGGGAATCGTCACAGAGTCACAATTTCACGTGTTGGCTGTCGATGATAGCCTTATAGACCGGAAGCTCATTGAGAGGCTCCTCAAAACCTCCTCATATCAAGTTACTACAGTTGATTCCGGAAGCAAGGCTTTAGAGTTTCTGGGTTTGCGTGAGAATGACCAGAGCGACCCAAGTACACCATCAGTTTCTCCTAACAATAATCAGGAAGTGGATGTCAACCTTGTTATCACGGACTACTGTATGCCTGGCATGACTGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTAGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATCAGCAAATGCTTAGAGGAAGGAGCAGAGGAATTCTTCTTGAAACCAGTGAGGCTATCAGACTTGAATAGGCTTAGGCCCCATATGATGAAGACCCAGAAGTTGAAGGATCAAACGCAGGAAAAAGATGAAAAGCTAGAAACCCCTGAGTTTCAATTAACACCACAGCCACTAGTAGAGCAACAACATCAACAATCACTACCTCAAGCAAACAATAACAAGAGGAAGGTCATGGAAGAGGGGCTTTCGCTTGAACCCGACAGAACAAGACCAAGATACAATGACATAGCTACTATGGTCTGA 651 0.4332 MGIVTESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRENDQSDPSTPSVSPNNNQEVDVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVRLSDLNRLRPHMMKTQKLKDQTQEKDEKLETPEFQLTPQPLVEQQHQQSLPQANNNKRKVMEEGLSLEPDRTRPRYNDIATMV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2369 216 CDD REC_typeA_ARR 11 141 - -
Dere01g2369 216 MobiDBLite consensus disorder prediction 170 189 - -
Dere01g2369 216 MobiDBLite consensus disorder prediction 194 208 - -
Dere01g2369 216 MobiDBLite consensus disorder prediction 170 216 - -
Dere01g2369 216 SUPERFAMILY CheY-like 8 162 IPR011006 -
Dere01g2369 216 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Dere01g2369 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 183 IPR045279 GO:0009736
Dere01g2369 216 Gene3D - 10 210 - -
Dere01g2369 216 SMART REC_2 9 142 IPR001789 GO:0000160
Dere01g2369 216 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2369 Dere-ChrDere01 37979654 37980994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2369 1 216 Response Regulator Gene Family AT3G57040 63.180 1.72e-93 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere01g2369 Response_reg 9.6e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2369 01 37979654 37980994 Dere01g2369 01 37979654 37980994 ECH