Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2361 ATGGAAATTCTGGGTAACATTGCTGACTCCATTCTCGGAAAGTTGGGCTCTCTTGCTTTAGAGGAGATTCAACTCTCCTTATCCTTCAACGATGACCTGGAGACGCTTCGTAGTTTTGTATCTTCCATTTCGGCGGTCCTCCTTGATGCAGAACAACGGCAAGAGGAGAGCCATGCGGTTAGAGATTGGTTGTGGAAGCTCAAAGACACTCTCAACGATGCACAAGACCTGTTAGATGATTTGACAGCGCAAGCTTTGAGTCAGAAAGTGGAGCCTCCATGTTTTATGGTCACTCAGGTACACAACTTCTTCTTCTGTAGCGAGATGGCTCGTCGAATTAGGGAAGTTAGGGAGAGGTTAGATCAGATAGACGAGGAGAGAAAGATGTTTGGCTTTACAATGCAGCTTGGTAACGATCGGATCCTTAGCAAGAGGGGGAACATGTGCCATTTTATGCATGTCACGGAGATAATTGGGCGAGAAAACGATAAAGAGGCAGTCATTGCAATGTTATCCAGCAATACTGATGAGAGTGTTTCTGTCATTCCTGTTGTGGGAATGGGGGGTTTGGGAAAGACTGCACTTGCTCAATCGGTATTTGAAGATGATTGGGTTAAAGGGTATTTTGAATTACGTCGTTGGGTATGGGTATCTGATGATTTGAATGCTGAAGATGTTGTGAAGAAAATTATCAGAGCTGTAACTGGTGCTGATTTTGACCTTCTTGAATCGCATGACTTGCATCTTTACCTTCTACAAATTTTATCTGGGAAGAAGTTTTTACTTGTCCTTGATGATGTTTGGATTGGGAATCCTGTTGAATGGGCTAGGCTGAGAAGTTTGTTAAAAACTGACGTCAGAGGAAGCAAAATTTTAATGACAACTCGATATAAAATTACTGCATCACTTATGGGTGGAAATAGTTTTTATCCTTTGGCTGGTTTGTCTCCTGATGCCTGCTGGTCTCTGTTTGAGAGATGGGCATTTATGGAGGGGGAAAGTACGAGACACCCAAATCTTACAAACATTGGTCGAGAGATAGTGGAGAGGTGTGGAGGAGTGCCTCTAGCAATACGAACTGTTGGAAGCTTACTGTGTTTAAATGCAAATGAAACATATTGGTTGTCTGTAAAAAATGATGAGAGTTGGAATAGGGCCCAAAGGGAAGATGATATTTTGCCAGTGCTCAAGTTAAGCTATGATCAATTGCCTTCCCGTCTAAAAGAATGCTATGCATATTGCTCATTGCTTCCTAAGGGCGAAGAATTTGATAAGGAAACAGTAATCCAATTGTGGATGGCACAAGGCTTAATTCATATAACTAGCAGATATGAGCAATTAGAAGACGTTGGAAGTTGGTATTTTGATGAGTTGGTGTCCAGATCCATTTTTGATGTTGTTCGTGAGAATCATAAAGCTGAGATAGTGAAGTGCAGAATGCATGATCTCTTGCACGATCTTGCTAGGTCCGTAGCCGGATCAGAGTGCTTATCAGTTAACTTTCATACTACCAATATGTTTGAAAGCCCAAGGCACGTGTCATTTTGGGGTCATTGCCTTAAAGAAGATATATTTCCTTTATTAAAAGCATCAAAGTTGAGGACACTTCTTTTGCCTATCAAATTGGGATCCTCATCAGGGTCCATTCTGGACATCCTTCTCTCTGGTTCAACTTACTTGCGCATATTGGATTTAAGCAATTCAGGCATAAGATATCTGCCCAGTTGCCTTGGTTATCTGAAGCATCTGAGGTATTTAAATCTGAATGGTAACCGTGATCTTAAATACCTTCCTGATTCCATTTGCAGGCTGCATTTTTTGCAGACATTGAAGCTTTTAGGCTGCATACAAATTAGTATGTTCCCCAGAAAATTCGGTAATTTGGTTTCACTTAGATATTTGATCATAAACTGCCCCAAAATGCGTACTTGGCAGAAACAACTTGGGAGTTTGACCTCTCTTCAGTCATTGTCGATTGTGCGTTGTGATAATCTTGTATCTCTATCTGAAGGGATCGAGCCCCTAAGTGCCCTTCGAACACTACGTATCCAAAACTGTGGCAAGTTAACTTCTTTGCCAAGGGGAATGGAAAATTGCACCGCTCTTGAGAATTTGGAAATTATCAACTGCCCAAAGATAAGTTTGTTTGATGATTGCGTGCAGGGTCTTTCTAATATTCGCTCATTAACTATCAAAGGTCTACCAAAGTTGGTGTTTCTACCCAACAAGCTTGAATGCTATAAGAGCACCCTGCAATATCTGTACATTTCAGATTGCCTCAGCCTCATGGGAATGCCTGAATGCCTCGAAAATCTTTCATCACTGATGCGTTTGTACATTATAGGTTGCCCCAACTTGCTAAACTTGCCTCATAAATTCAGTTGTCTTGCTTCTCTTCAAGTATTGCAAATTGATCAATGTCCCCTTTTGAGTTCAAGATGCCAAAGAGATGTTGGCGAAGACTGGCCCAAGATAGCTCATGTACCAGAGATCTATGTTGACAAAAGGAGAATATAG 2517 0.414 MEILGNIADSILGKLGSLALEEIQLSLSFNDDLETLRSFVSSISAVLLDAEQRQEESHAVRDWLWKLKDTLNDAQDLLDDLTAQALSQKVEPPCFMVTQVHNFFFCSEMARRIREVRERLDQIDEERKMFGFTMQLGNDRILSKRGNMCHFMHVTEIIGRENDKEAVIAMLSSNTDESVSVIPVVGMGGLGKTALAQSVFEDDWVKGYFELRRWVWVSDDLNAEDVVKKIIRAVTGADFDLLESHDLHLYLLQILSGKKFLLVLDDVWIGNPVEWARLRSLLKTDVRGSKILMTTRYKITASLMGGNSFYPLAGLSPDACWSLFERWAFMEGESTRHPNLTNIGREIVERCGGVPLAIRTVGSLLCLNANETYWLSVKNDESWNRAQREDDILPVLKLSYDQLPSRLKECYAYCSLLPKGEEFDKETVIQLWMAQGLIHITSRYEQLEDVGSWYFDELVSRSIFDVVRENHKAEIVKCRMHDLLHDLARSVAGSECLSVNFHTTNMFESPRHVSFWGHCLKEDIFPLLKASKLRTLLLPIKLGSSSGSILDILLSGSTYLRILDLSNSGIRYLPSCLGYLKHLRYLNLNGNRDLKYLPDSICRLHFLQTLKLLGCIQISMFPRKFGNLVSLRYLIINCPKMRTWQKQLGSLTSLQSLSIVRCDNLVSLSEGIEPLSALRTLRIQNCGKLTSLPRGMENCTALENLEIINCPKISLFDDCVQGLSNIRSLTIKGLPKLVFLPNKLECYKSTLQYLYISDCLSLMGMPECLENLSSLMRLYIIGCPNLLNLPHKFSCLASLQVLQIDQCPLLSSRCQRDVGEDWPKIAHVPEIYVDKRRI 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2361 838 Gene3D - 140 306 IPR027417 -
Dere01g2361 838 Coils Coil 64 91 - -
Dere01g2361 838 SUPERFAMILY L domain-like 479 810 - -
Dere01g2361 838 Gene3D - 8 122 - -
Dere01g2361 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 414 IPR027417 -
Dere01g2361 838 Gene3D - 400 491 IPR036388 -
Dere01g2361 838 PRINTS Disease resistance protein signature 351 365 - -
Dere01g2361 838 PRINTS Disease resistance protein signature 254 268 - -
Dere01g2361 838 PRINTS Disease resistance protein signature 181 196 - -
Dere01g2361 838 PRINTS Disease resistance protein signature 578 594 - -
Dere01g2361 838 Gene3D - 314 399 IPR042197 -
Dere01g2361 838 Pfam NB-ARC domain 160 401 IPR002182 GO:0043531
Dere01g2361 838 Pfam Rx N-terminal domain 10 92 IPR041118 -
Dere01g2361 838 Coils Coil 106 126 - -
Dere01g2361 838 FunFam Probable disease resistance protein At1g61300 144 308 - -
Dere01g2361 838 PANTHER DISEASE RESISTANCE PROTEIN RP 64 812 IPR044974 GO:0006952
Dere01g2361 838 Gene3D Ribonuclease Inhibitor 492 825 IPR032675 -
Dere01g2361 838 FunFam Probable disease resistance protein At1g63360 400 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2361 Dere-ChrDere01 37899252 37901768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2361 186 770 WRKY Transcription Factor Family AT5G45050 22.189 7.45e-10 60.8