Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2337 ATGAGGGCATGGTTTGATTGCTTTGGCTTTAGCAGTGCAAGAAGAGTGAAAGATCTATCATTTCCGTCTCCAGATAATTTCAATTCTTCAGGGAAAGAAAAAAGTAAGAAACTAAAAGGAGACGGTGTTTGGATATCTACTGCTTTCTCTGCGGTAATGCCTTACCTTGTCCGGGAGAAATTATTTATTGGTGATATTAGCGACGCAGCAGAGATCCTTCAAAATGGTAGCGCTGAAATCACGCATATTTTATCAGTTCTTAGCTCTGCTTCAATATCATTCTTTTCTGAATGGCGTAGTAGCTTAATGATCCCTGCGAAGGAAATTCAGAAGGTTTATGTTGGTGGCTGTAACGGTGGTGCTCCTGAAGATGACTTGGGTGATATGTCAAAGAGTCCGTTGTCACCGGGGAACCTTTTATACTCATTGGAATATGCAGGTAAAGATTTGAAGCTGGTGAGGATGGCTGTCCCTCTGAGGGATACTGAAAATGAGGATTTGTTAGATTATTTGGATGTTTGCCTCAATTTTATTGATCGAAGTAGAAAAGATGGTTCTGTTTTGGTCCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATTTGATGAGAACTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTAAAGAAGAGCTGTGAATTTGTTTGCCCCAATGATGGTTTTCTAGAGCAGTTAAAAATGTTTGAGAAGATGGGCTTTAAGGTGGATCGTTCTAGCTCTATATACAGGCGCTTTCGTCTGAGAGTACTGGGTGAGCATTATAACTCAGGGGTTAGGATTGACGGTTCTAAACTTGGAGCTGATCCTGGCTTGCCTGTTGGAGTTGCTTCAGTGGTGGAAGGAGCCCCAAGAGTAGGAAATAATTGTTGTCCTACATATCGCTGTAAGAAGTGCCGACGGGTAGTTGCATTGAAGGAACATGTCGTAGATCATGTTCCAGGTGAGGGTGAGACATCCGGCGAGTGGCATAAGTGGAGGAGTGACAATCTTTTTAACAAGTCTAATGAATCTGAATGTTCGTCCATATTTATTGAACCACTACAATGGATGAAAGCAGTTGAGGAGGGTGCATCGGAGGGGAAGTTGAGCTGTGCCCATTGTGATGCCCGTTTGGGAAACTTCAATTGGTTTGGCATGCAATGCAGCTGCGGAAGCTGGATAACCCCAGCGTTTCAGATCCACAAGTGCCGAGTGGATGCAAGCCCCGTCTAA 1251 0.4333 MRAWFDCFGFSSARRVKDLSFPSPDNFNSSGKEKSKKLKGDGVWISTAFSAVMPYLVREKLFIGDISDAAEILQNGSAEITHILSVLSSASISFFSEWRSSLMIPAKEIQKVYVGGCNGGAPEDDLGDMSKSPLSPGNLLYSLEYAGKDLKLVRMAVPLRDTENEDLLDYLDVCLNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRTEHLSQEDALQSLKKSCEFVCPNDGFLEQLKMFEKMGFKVDRSSSIYRRFRLRVLGEHYNSGVRIDGSKLGADPGLPVGVASVVEGAPRVGNNCCPTYRCKKCRRVVALKEHVVDHVPGEGETSGEWHKWRSDNLFNKSNESECSSIFIEPLQWMKAVEEGASEGKLSCAHCDARLGNFNWFGMQCSCGSWITPAFQIHKCRVDASPV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2337 416 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 168 223 IPR000387 GO:0016311|GO:0016791
Dere01g2337 416 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 53 413 - -
Dere01g2337 416 Pfam Dual specificity phosphatase, catalytic domain 151 243 IPR000340 GO:0008138|GO:0016311
Dere01g2337 416 ProSiteProfiles Dual specificity protein phosphatase domain profile. 53 247 IPR020422 GO:0006470|GO:0008138
Dere01g2337 416 FunFam Dual specificity protein phosphatase 12-like 56 264 - -
Dere01g2337 416 Gene3D Protein tyrosine phosphatase superfamily 56 264 IPR029021 -
Dere01g2337 416 ProSitePatterns Tyrosine specific protein phosphatases active site. 189 199 IPR016130 GO:0016311|GO:0016791
Dere01g2337 416 CDD DSP_DUSP12 56 249 - -
Dere01g2337 416 PIRSF DUSP12 143 416 IPR016278 GO:0006470|GO:0008138
Dere01g2337 416 PIRSF DUSP12 24 98 IPR016278 GO:0006470|GO:0008138
Dere01g2337 416 SMART dsp_5 53 244 IPR020422 GO:0006470|GO:0008138
Dere01g2337 416 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 247 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2337 Dere-ChrDere01 37683351 37687436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2337 152 243 Protein tyrosine phosphatase (PTP) family AT3G06110 38.710 1.04e-15 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2337 01 37683351 37687436 Dere01g2337 01 37683351 37687436 ECH