Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2335 ATGGACGATGCGGTCTTTCCCTTTTGTCTTCATAATCCAGACAAATTGAGACTATTCCTGATTTCAAAAACAACTGGTATTCGGTCAGAATATGCATATTCTACTTTTACTTGCCTTTGCCTTATAAAAGTTGAATGCACCAGAAACAGAACAGTGCAGTTGCTGAAGAGTGTTTCTCCACCGGACACGGGTATTAAGTCACAGTTTAAGCTTGGTATGGACTCTCAGCTGCAGATTCCCTTGAGTTTGGACTTTGGGTACACATTTTTTTTTTGCTATTCCAATCTAACAAAACGAAAACTCTCCTATGGTGGGTCACCTACTCCCTATATTATGAAGAACATCAAGTGGGGCCTAGTTACTCAGATCGATAACCTTATGGACTCTATGGTCACTGAACGGCTCTCAAGATCTTCTGCACGTGTTCAATATTTTTACGTTTCCAGTGTGCTCTGTTATTGGGTTTCTGATTTCATGGGACTCTGTCATGGAAAACCTATTGAAATCTCCCAAAGTCAAGGAGATGACCCAATATTTCCCGGTGACAAAGACGGCCTTCCAAATTCTCAAGCAACCAAATCCTCAAAGTTCCCCTTTTATAGCCCAAGTCCCTTGCCAAGTCTCTTCAAGAACTCACCGGCAAATTCAAGTGTGAGCTCAACTCCTTTGCGCATTTTCAAGCGCCCATTTCCTCCTCCTTCGCCGGCGAAGCACATTCGGGCATTGCTCGCTCGCCGGCATGGTTCTGTGAAGCCAAACGAGGCCTCAATCCCTGAAGGAGGTGAATGCGAGGTTGGGTTGGATAAGAATTTCGGGTTTTCGAAGCAGTTCACGGCTCATTACGAGCTTGGAGAAGAGGTGGGTCGCGGGCATTTTGGGTATACATGCTCTGCCAAGGGGAAGAAAGGCAGCTTGAAGGGGCAGGATGTGGCCGTCAAAGTCATTCCTAAATCTAAGATGACAACAGCAATCGCCATAGAAGATGTACGGAGAGAAGTGAAAATATTGCGGGTTCTTGCAGGACATAAGAACCTGGTGCAATTCTATGAAGCCTATGAAGATGATGAAAATGTTTATGTAGTTATGGAATTATGCAAAGGGGGTGAGCTGCTAGATAGAATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGATGCCAAGGTTGTTATGATTCAGATATTAAGTGTGGTAGCCTTCTGTCATCTGCAGGGTGTGGTTCATCGTGATCTCAAGCCAGAGAATTTTCTTTTTACTTCTAAAGATGAAAACTCCACATTGAAGGCCATTGATTTTGGACTGTCTGACTATGTAAAGCCAGATGAGAGGTTGAATGATATTGTGGGTAGTGCATATTATGTTGCTCCTGAAGTTTTGCATAGATCATATGGGACAGAAGGAGACATGTGGAGCATTGGTGTAATTGCATATATTCTTCTGTGTGGAAGCCGGCCCTTTTGGGCCCGAACAGAATCTGGCATATTTCGTGCTGTCCTGAAGACTGATCCAAGTTTTGATGATGCTCCTTGGCCTTCTTTATCAGCTGATGCAATTGATTTTGTAAAGAGGCTCTTGAATAAGGATTACCGTAGAAGACTAACTGCAGCTCAGGCTCTTTGTCATCCTTGGCTGGCTAATCATCATGATGAGCTGAAGATACCTGTGGATATGATAATCCTCAAGCTTGTTAGAGCTTACATATCTTCATCTTCTTTACGCAAATCAGCATTAGGGGCTCTTGCAAAGACATTAACAATAGCTCAGCTAGCTTATCTCAGAGAACAGTTTGCACAGTTAGGGCCGAACAAAAGTGGATTTATCTCCATGCAGAACTTTAAGACGGCTGTTTTAAGGAGCTCCACTGATGCCTCAAAGGACTCACGGGTTTTAGATTACGTAAACATGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTGCACCAACTAGAGGGAACCGAGAGCTGGGAGCAACATGCAAGGCATGCCTATGAACTGTTTGAAAAGGAAGGAAATCGACCAATTATGATTGAAGAGCTTGCCTCAGAACTCTGGCTTAGCCCATCAGTACCCGTTCATGTTGTACTCCAAGATTGGATAAGACACTCTGATGGGAAGCTTAGTTTCTTAGGGTTTGTCAGACTTCTGCATGGGCCATCTTCCCACACAAGTCAGAAGGTTTGA 2208 0.4361 MDDAVFPFCLHNPDKLRLFLISKTTGIRSEYAYSTFTCLCLIKVECTRNRTVQLLKSVSPPDTGIKSQFKLGMDSQLQIPLSLDFGYTFFFCYSNLTKRKLSYGGSPTPYIMKNIKWGLVTQIDNLMDSMVTERLSRSSARVQYFYVSSVLCYWVSDFMGLCHGKPIEISQSQGDDPIFPGDKDGLPNSQATKSSKFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGGECEVGLDKNFGFSKQFTAHYELGEEVGRGHFGYTCSAKGKKGSLKGQDVAVKVIPKSKMTTAIAIEDVRREVKILRVLAGHKNLVQFYEAYEDDENVYVVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEGDMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDDAPWPSLSADAIDFVKRLLNKDYRRRLTAAQALCHPWLANHHDELKIPVDMIILKLVRAYISSSSLRKSALGALAKTLTIAQLAYLREQFAQLGPNKSGFISMQNFKTAVLRSSTDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGTESWEQHARHAYELFEKEGNRPIMIEELASELWLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGPSSHTSQKV 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2335 735 ProSitePatterns Protein kinases ATP-binding region signature. 287 313 IPR017441 GO:0005524
Dere01g2335 735 CDD STKc_CAMK 280 542 - -
Dere01g2335 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Dere01g2335 735 FunFam CDPK-related kinase 1 274 369 - -
Dere01g2335 735 ProSiteProfiles EF-hand calcium-binding domain profile. 586 621 IPR002048 GO:0005509
Dere01g2335 735 FunFam CDPK-related kinase 1 581 653 - -
Dere01g2335 735 FunFam Calcium-dependent protein kinase SK5 453 547 - -
Dere01g2335 735 Gene3D Phosphorylase Kinase; domain 1 274 370 - -
Dere01g2335 735 Gene3D - 584 653 - -
Dere01g2335 735 SMART serkin_6 281 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2335 735 Pfam Protein kinase domain 281 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2335 735 SUPERFAMILY EF-hand 573 726 IPR011992 -
Dere01g2335 735 Gene3D Transferase(Phosphotransferase) domain 1 371 561 - -
Dere01g2335 735 Gene3D - 563 723 - -
Dere01g2335 735 PANTHER SERINE/THREONINE-PROTEIN KINASE 267 711 - -
Dere01g2335 735 SUPERFAMILY Protein kinase-like (PK-like) 274 572 IPR011009 -
Dere01g2335 735 FunFam CDPK-related kinase 3 273 445 - -
Dere01g2335 735 ProSiteProfiles Protein kinase domain profile. 281 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2335 Dere-ChrDere01 37656783 37667887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2335 188 731 EF-hand Containing Proteins AT3G50530 70.326 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere01g2335 Pkinase 6.6e-69 CL0016