Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2326 ATGTTATCTCGGCCGTGTTCTGTGGTTGCAACAATATTATTTGTTGCTGCACAAACACTTGTGACCGTTAATTCGGCTTCAGAAGGTGATAAAATAAGCAGCTTGCCGGGGCAGCCATCGGTAAATTTCCAGCAATATGCCGGTTACATTGCAGTCAACGACGAGCAGCAGAGAGCTCTGTTTTACTATTTTGCAGAAGCAGAAGTAGACCCTGCTTCCAAGCCTCTGGTTCTCTGGTTGAATGGAGGGCCTGGTTGTTCCTCTGTTGGAGCTGGAGCCTTCGTTGAGCATGGCCCCTTCAAACCGAGCGAAAACGTTCTTGTGAAAAATGATAATAGCTGGAACAAAGAAGCAAATATGCTATACCTGGAATCCCCAGCTGGAGTTGGTTTCTCTTATTCTGCCAATAAATCTTTTTATGGCTTTGTCACCGATGAAATTACAGCGAGGGATAATCTTGTCTTCCTGGAACTTTGGTTCAATAAATTCCCACAGTACAAGAACAACGATTTCTTTATCACTGGGGAGAGCTATGCAGGCCACTATGTTCCCCAACTTGCACAACTCATTGTTCAAACCAAGACCAAGTTCAATCTCAAGGGGATAGCTATAGGGAATCCTCTTCTGGAATTCAATACTGATTTCAACTCGAGAGCAGAGTTCTTCTGGTCACACGGACTAATATCAGATTCAACTTATGAAAGCTTCACCAAAGTATGCAACTTCTCCCAAATCAGGAGACAACTTCAAAGTGGGACTCTCACTGCGGTCTGTGCAGGAGTGAATAAACTAGTATGGAGGGAGGTTGGTAAATACGTTGATGCATATGATGTCACTCTTGATGTCTGCTTGTCAGCACTGGATCAACAGGCTATGGTGTTGAACCAACTGCAAGAGACAGAGAAGATAGACGTTTGCGTGGAGGATGAAACACTTAATTACTTGAACAGGAAAGAAGTACAGGAAGCTCTTCATGCCAAGCTTGTCGGAATCTCCACATGGTCAATTTGCAGCGAAGTTCTCAAATATGATATGCAGAATCTAGAGATACCAACAATTCCTATCCTGGGGAACCTTGTGAAGTCAGGCATCAGGGTTCTAGTATACAGTGGAGATCAAGATTCAGTGATCCCATTAACTGGGACACGGACACTGGTGAATGGATTAGCGAAGGAGTTTGGACTGAATACAACTGTGCCCTACAGAGCTTGGTTTGAAGGAAGACAGGTCGCCGGATGGACACAAGTATATGGAGACATTTTATCATTCGCCACCATAAGAGGGGCAGCTCATGAAGCTCCCTTTTCACAGCCAGAGAGATCACTGGGGCTATTGAGAGCATTTTTGGAAGGCAAGCCACTTCCTGAAGCATTCCCTTCGTCGTGA 1386 0.4481 MLSRPCSVVATILFVAAQTLVTVNSASEGDKISSLPGQPSVNFQQYAGYIAVNDEQQRALFYYFAEAEVDPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENVLVKNDNSWNKEANMLYLESPAGVGFSYSANKSFYGFVTDEITARDNLVFLELWFNKFPQYKNNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYESFTKVCNFSQIRRQLQSGTLTAVCAGVNKLVWREVGKYVDAYDVTLDVCLSALDQQAMVLNQLQETEKIDVCVEDETLNYLNRKEVQEALHAKLVGISTWSICSEVLKYDMQNLEIPTIPILGNLVKSGIRVLVYSGDQDSVIPLTGTRTLVNGLAKEFGLNTTVPYRAWFEGRQVAGWTQVYGDILSFATIRGAAHEAPFSQPERSLGLLRAFLEGKPLPEAFPSS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2326 461 Gene3D alpha/beta hydrolase 26 284 IPR029058 -
Dere01g2326 461 FunFam Carboxypeptidase 25 455 - -
Dere01g2326 461 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Dere01g2326 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Dere01g2326 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Dere01g2326 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Dere01g2326 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Dere01g2326 461 Pfam Serine carboxypeptidase 37 451 IPR001563 GO:0004185|GO:0006508
Dere01g2326 461 SUPERFAMILY alpha/beta-Hydrolases 33 455 IPR029058 -
Dere01g2326 461 Gene3D - 352 451 - -
Dere01g2326 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 438 IPR001563 GO:0004185|GO:0006508
Dere01g2326 461 FunFam Carboxypeptidase 352 451 - -
Dere01g2326 461 Gene3D - 306 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2326 Dere-ChrDere01 37574967 37577433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2326 314 454 Calmodulin-binding Proteins AT2G22960 30.496 1.52e-16 75.9