Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2325 ATGGTATCTCAACCATGGATCTTCATGGCCATAATCTGTGCAAGTTTACTGAGCAAGTGCTCACTAACAGAATCTTCTTCAGAAGTTGAAGAGATCCATTTACCAGGCCAGCCAAATGTCAGTTTTCACCAATATGGGGGCTACATACCCGTAGATGACAAGCACCAAAGAGCTCTGTATTTCTACTTCGTTGAAGCACAAACAAACCCCTCTTCCAAGCCCCTTGTTCTCTGGCTCAATGGAGGTCCCGGTTGTTCCTCTGTGGGACTTGGAGCTTTCACTGAACATGGCCCTTTTATCACTAATTATGGTGCGGTCATTACACAGAATAAGTACAGCTGGAATAGAGAGGCCAACATTTTGTACTTGGAATCACCAGCAGGTGTTGGATTTTCATATACTACCGATGTGTCATTTTACAGCTCTGTGAATGATGAGACCACAGCCCGAGACAACTTAGTATTTCTGCAGCGCTGGTTCGCTAAGTTCCCGCAGTACATGAACAATGATTTTTACATCATGGGGGAGAGCTATGCAGGACACTATGTGCCTCAACTTGCAGAGCTTATTGTTAAGAGCAAAGAGAACTTCAACCTGAGGGGTATAGGAGTGAGAACCATACGAGACTTGCCCTTTTTTACTTTCATGTCACTATTCAGTCATATGTTGGCTAAATTGCAATACATTTTGCAGATAGGAAACCCTCTTTTGGACATCGATGCTGATTCCAATTCAGTCGATGAATACTACTGGTCTCATGGCATTATATCAGATTATGCATTTGAACTTCGGTCTTCAGTTTGTAACAGTTCAAAATCAACGAGACAAATTGATAGAGGCTGTTTCTCCTTGGAGTGTCTTTCCGTAATAGGTGAGATCAGCGACGAATATTCTGAGATAGATTCCATTGATCCATATTATGTCATTGGAGACAAATGTCTGTCTTATAATATATCACAAGCTACGTTTCTCCGTCAACGGCTAAGGTCCAGCATGTCTCAGATTTTAAAATCTATGCATTTGCTAAAAGAGAAGAACACTTTGCAGGAACTAGACGAGTGTCCTGAGAAAAATGCAGAGATGTACTTGAACAGAAAAGATGTGCAGATGGCTATGCACGCTCGCCTCGTTGGAGTCGCCCAATATCGTTTGTGTAACCACGTTGTGTTTGATAAATATAGCCCAGAAGACAAAGAAATACCAACAATCAACATAGTGGGGTCGCTTGTGAAGTCTGGCCTTCGAGTATATGTTTATAGTGGGGATCAAGACTCTGTGGTTCCATTCATTGGTACTCGAAGATTGGTGGATAAAGTAGGAAAGAAACTAGGATTGAAAACGAGTGTGGCATACAGTGCGTGGTTTGTGGGAAAACAGGTTGGAGGATGGACACAAGCTTATGGGGATCGTCTTATTTATGCTACTGTAAGAGGGGCTTCACACAGCACCCCAACCACTCAACCTGAGAGATCCTTTGTGTTGTTTCGAGCTTTTCTTCGTGGGAAACCACTCCCTAGGCCTAAATCATGA 1530 0.4281 MVSQPWIFMAIICASLLSKCSLTESSSEVEEIHLPGQPNVSFHQYGGYIPVDDKHQRALYFYFVEAQTNPSSKPLVLWLNGGPGCSSVGLGAFTEHGPFITNYGAVITQNKYSWNREANILYLESPAGVGFSYTTDVSFYSSVNDETTARDNLVFLQRWFAKFPQYMNNDFYIMGESYAGHYVPQLAELIVKSKENFNLRGIGVRTIRDLPFFTFMSLFSHMLAKLQYILQIGNPLLDIDADSNSVDEYYWSHGIISDYAFELRSSVCNSSKSTRQIDRGCFSLECLSVIGEISDEYSEIDSIDPYYVIGDKCLSYNISQATFLRQRLRSSMSQILKSMHLLKEKNTLQELDECPEKNAEMYLNRKDVQMAMHARLVGVAQYRLCNHVVFDKYSPEDKEIPTINIVGSLVKSGLRVYVYSGDQDSVVPFIGTRRLVDKVGKKLGLKTSVAYSAWFVGKQVGGWTQAYGDRLIYATVRGASHSTPTTQPERSFVLFRAFLRGKPLPRPKS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2325 509 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Dere01g2325 509 FunFam Carboxypeptidase 402 501 - -
Dere01g2325 509 SUPERFAMILY alpha/beta-Hydrolases 30 505 IPR029058 -
Dere01g2325 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 471 484 IPR001563 GO:0004185|GO:0006508
Dere01g2325 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Dere01g2325 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Dere01g2325 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Dere01g2325 509 Gene3D alpha/beta hydrolase 21 505 IPR029058 -
Dere01g2325 509 Pfam Serine carboxypeptidase 231 500 IPR001563 GO:0004185|GO:0006508
Dere01g2325 509 Pfam Serine carboxypeptidase 36 204 IPR001563 GO:0004185|GO:0006508
Dere01g2325 509 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 488 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2325 Dere-ChrDere01 37570255 37572938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2325 359 504 Calmodulin-binding Proteins AT2G22960 27.891 2.73e-15 72.4