Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2323 ATGTTATCTCGGTCGTGTTCTGTGGTTGCAACAATATTATTTGTTGCTGCACAAACCCCTGTGACCGTTTATTCGGCTTCAGAAGGTGATAAGATAAGCAGCTTGCCGGGGCAGCCATCGGTAAATTTCCATCAATATGCCGGTTACATTGCCGTCGACGACGAGCAGCAGAGAGCTCTGTTTTACTATTTTGCAGAAGCAGAAGTAGACCCTGCTTCCAAGCCTCTGGTTCTCTGGTTGAATGGAGGGCCTGGTTGTTCCTCTGTTGGAGCTGGAGCCTTCGTTGAGCATGGCCCCTTCAAACCGAGCGAAAACGTTCTTGTGAAAAATGATAATAGCTGGAACAAAGAAGCAAATATGCTATACCCGGAATCCCCAGCTGGAGTTGGTTTCTCTTATTCTGCCAATAAATCTTTTATGGCTTTGTCACCGATGAAATTACAGGATAATCTTGTCTTCATGGAACGTTGGTTCAATAAATTCCCACAGTACAAGAACAACGATTTCTTTATCACTGGGGAGAGCTATGCAGGTAGCAGTAGTACCTTTGAGATGAATATTATTTTCGATTTTAGAAGCGCAGAACTTAACGCATTCTTGTTATCAGGCCACTATGTTCCCCAACTTGCACAACTCATTGTTCAAACCAAGACCAAGTTCAATCTCAAGGGGATAGCTATAGGGAATCCTCTTCTGGAATTCAATACTGATTTCAACTCGAGAGCAGAGTTCTTCTGGTCACACGGACTAATATCAGATTCAACTTATGAAAGCTTCACCAAAGAATGCAACTTCTCCCAAATCAGGAGACAACTTCAAAGTGGGACTCTCACTGCGGTCTGTGCAGGAGTGAATAAACTAGTATGGAGGGAGGTTGGTAAATACGTTGATGCATATGATGTCACTCTTGATGTCTGCTTGTCAGCACTGGATCAGCGGGCTATGGTGTTGAACCAACTGCAAGAGACAGAGAAGATAGACGTTTGCGTGCAGGATAAAACACATAATTACTTGAACAGGAAAGAAGTACAGGAAGCTCTTCATGCCAAGCTTGTCGGAATCTCCACATGGTCAATGTGCAGCGAAGTTCTCAAATATGATATGCGGAATCTAGAGATACCAACCATTCTTATTCTGGGGAACCTTGTGAAGTCAGGCATCAGGGTTCTAGTATACAGAGTTTGGTTTGAAGGAAGACAGGTTGCCGGATGGACACAAGTATATGGAGACATTTTATCATTCGTCACCATAAGAGGGGCCGCTCATGAAGCTCCCTTTTCACAGCCAGAGAGATCATTGGGGCTATTGAGAGCATTTTTGGAAGGCAAGCCACTTCCTGAAGCATTCCCTTCGTCGTGA 1359 0.4422 MLSRSCSVVATILFVAAQTPVTVYSASEGDKISSLPGQPSVNFHQYAGYIAVDDEQQRALFYYFAEAEVDPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENVLVKNDNSWNKEANMLYPESPAGVGFSYSANKSFMALSPMKLQDNLVFMERWFNKFPQYKNNDFFITGESYAGSSSTFEMNIIFDFRSAELNAFLLSGHYVPQLAQLIVQTKTKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYESFTKECNFSQIRRQLQSGTLTAVCAGVNKLVWREVGKYVDAYDVTLDVCLSALDQRAMVLNQLQETEKIDVCVQDKTHNYLNRKEVQEALHAKLVGISTWSMCSEVLKYDMRNLEIPTILILGNLVKSGIRVLVYRVWFEGRQVAGWTQVYGDILSFVTIRGAAHEAPFSQPERSLGLLRAFLEGKPLPEAFPSS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2323 452 SUPERFAMILY alpha/beta-Hydrolases 21 447 IPR029058 -
Dere01g2323 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 412 425 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 Gene3D alpha/beta hydrolase 26 307 IPR029058 -
Dere01g2323 452 FunFam Uncharacterized protein 27 119 - -
Dere01g2323 452 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Dere01g2323 452 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 429 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 Pfam Serine carboxypeptidase 395 442 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 Pfam Serine carboxypeptidase 37 179 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 Pfam Serine carboxypeptidase 202 392 IPR001563 GO:0004185|GO:0006508
Dere01g2323 452 Gene3D - 391 442 - -
Dere01g2323 452 Gene3D - 329 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2323 Dere-ChrDere01 37517614 37520081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2323 337 445 Calmodulin-binding Proteins AT2G22960 24.818 2.76e-07 48.9