Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2317 ATGGCATCGAGCTCAATGTCGTCCTCTGGGTCATGGAGTGCTAAGGAGAACAAAGCCTTTGAAAGGGCTCTGGCAGTTCATGACAAGGACACCCCTGATCGTTGGTACAATGTTGCCAGGGCTGTCGGTGGGAAAACACCAGAGGAGGTGAAGAGGCACTATGAGATGCTGGTGCAGGACGTTAAGCATATAGAATCAGGGCATGTGCCCTTCCCCAATTACAAGAAAAGTGGAGGCTTTGATGGGGGAAAAAGGCTGAAAAACCCGAAGCTCCAGTGA 279 0.509 MASSSMSSSGSWSAKENKAFERALAVHDKDTPDRWYNVARAVGGKTPEEVKRHYEMLVQDVKHIESGHVPFPNYKKSGGFDGGKRLKNPKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2317 92 MobiDBLite consensus disorder prediction 68 92 - -
Dere01g2317 92 Gene3D - 2 71 - -
Dere01g2317 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Dere01g2317 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Dere01g2317 92 FunFam Transcription factor SRM1 4 71 - -
Dere01g2317 92 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Dere01g2317 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Dere01g2317 92 SUPERFAMILY Homeodomain-like 4 61 IPR009057 -
Dere01g2317 92 CDD SANT 16 58 IPR001005 -
Dere01g2317 92 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2317 Dere-ChrDere01 37462802 37463153 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere01g2317 Myb_DNA-binding 7.5e-07 CL0123