Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2311 ATGGCTTCAAGACCCATCGTTCCACAACAGGCCAGAGGTGATGCAGTCGTTGGGGTAGGTAAGCAGCAGAAGAAGAATGCAGTGGCCGAGGGAAGAAACCGCAGAGCACTGGGCGACATTGGAAATATGGTGACTGTAAAAGGAGTAGAGGTCAAGCCTAACCGCCCCATCACGAGGAGTTTCTGTGCCCAATTACTCGCGAATGCCCAAGCTGCAGCAGCTGCTGAAAACAACAAGAAACAGGCTTGTGCTGATGTGGTTGGACCTGCTCCTGTTATTGATGGAGTTGTAGCTGCAAAGAGAGTCGCACCAAAGCCGGCTCAGAGGAAAGTCACAGTTAAACCGAAGCCCCAAGAAGTCACTGACATAAGCTCAGCTGAAGAGGTTAAGCAAGAGAAGTCTGTGAACAAGAAAAAGGAAGGAGATGGAAACTCGAGGAAGAAATCACATACTCTGACATCAGTTCTCACTGCTCGAAGCAAGGCAGCATGTGGTCTGACAAAGAAACCAAAGGAGCAGATTGTTGATATAGACGCAGCTGACGCTGATAATGAACTTGCTGCTGTTGAATATATAGATGACATTTACAAATTTTACAAGCTGGTGGAGCATGAGAACCGCCCTCACGACTATATGGACTCACAACCGGAACTCAATGAGAGGATGAGAGCTATCTTGGTGGATTGGTTGATAGATGTACACAGAAAGTTCGACCTTTCACTTGAAACACTGTATCTCACTGTCAATATAATTGATCGCTTCCTTGCGATCAAGACTGTGCCAAGGAAGGAACTCCAATTGGTTGGCATCAGTGCCATGCTCATGGCATCCAAGTATGAAGAAATCTGGCCACCTGAGGTTAATGACTTTGTGTGCCTCTCAGACAGAGCTTACACTCACGAACAGATATTGGTGATGGAGAAAATCATATTGGGCAAGCTGGAATGGACTATGACTGTGCCCACTACTTACGTTTTCCTTGTTCGTTTCATCAAGGCTTCAATTCCTGATCAGGAGTTGGAAAACATGGCCTATTTTCTTTCTGAGTTGGGTGCCATGAACTATGCCACCATTATGTATTGCCCATCAATGGTTGCTGCCTCAACAGTCTATGCTGCTCGATGCACTCTCAATAAGAGCCCTGCTTGGAATGACACACTCAAGCTACACACTGGATACTCAGAAGCACAGCTGATGGATTGCGCTAGATTATTGGTTGGCTTCCACGCCATGGCTGGGAATGGAAAGCTTCAGGTGGCGTATAGAAAATACTCGGATCCCAATAAAGGAGCTGTGGCACTGCTTCCTCCAGCTAGAAATCTCCTGTCCGCGGACTGTGCTGCTAGAGTCTGA 1353 0.4708 MASRPIVPQQARGDAVVGVGKQQKKNAVAEGRNRRALGDIGNMVTVKGVEVKPNRPITRSFCAQLLANAQAAAAAENNKKQACADVVGPAPVIDGVVAAKRVAPKPAQRKVTVKPKPQEVTDISSAEEVKQEKSVNKKKEGDGNSRKKSHTLTSVLTARSKAACGLTKKPKEQIVDIDAADADNELAAVEYIDDIYKFYKLVEHENRPHDYMDSQPELNERMRAILVDWLIDVHRKFDLSLETLYLTVNIIDRFLAIKTVPRKELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGKLEWTMTVPTTYVFLVRFIKASIPDQELENMAYFLSELGAMNYATIMYCPSMVAASTVYAARCTLNKSPAWNDTLKLHTGYSEAQLMDCARLLVGFHAMAGNGKLQVAYRKYSDPNKGAVALLPPARNLLSADCAARV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2311 450 PIRSF Cyclin_A_B_D_E 1 450 IPR046965 GO:0016538|GO:0044772
Dere01g2311 450 CDD CYCLIN_AtCycB-like_rpt1 171 316 - -
Dere01g2311 450 PANTHER CYCLINS 140 426 IPR039361 -
Dere01g2311 450 FunFam G2/mitotic-specific cyclin 207 315 - -
Dere01g2311 450 ProSitePatterns Cyclins signature. 223 254 IPR006671 -
Dere01g2311 450 MobiDBLite consensus disorder prediction 108 150 - -
Dere01g2311 450 MobiDBLite consensus disorder prediction 121 147 - -
Dere01g2311 450 SMART Cyclin_C_2 321 438 IPR004367 -
Dere01g2311 450 Pfam Cyclin, C-terminal domain 321 437 IPR004367 -
Dere01g2311 450 Gene3D - 208 319 - -
Dere01g2311 450 SUPERFAMILY Cyclin-like 183 318 IPR036915 -
Dere01g2311 450 Gene3D - 194 433 - -
Dere01g2311 450 Pfam Cyclin, N-terminal domain 194 318 IPR006671 -
Dere01g2311 450 CDD CYCLIN_AtCycB-like_rpt2 321 437 - -
Dere01g2311 450 SMART cyclin_7 228 312 IPR013763 -
Dere01g2311 450 SMART cyclin_7 325 407 IPR013763 -
Dere01g2311 450 FunFam G2/mitotic-specific cyclin-1 316 433 - -
Dere01g2311 450 SUPERFAMILY Cyclin-like 320 438 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2311 Dere-ChrDere01 37397706 37400300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2311 1 448 Core Cell Cycle Gene Families AT4G37490 53.763 2.60e-150 432