Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2304 ATGTACGCATCACACCTTATCTCTGCACTTGGCTTTTTTTCTCGAAAGTGCAGAGCCATGGATCTCTTCTCTGCTCCATCTTTACTCTTCCTCTTCCTCTCCCTTCTCTTCTTCTATTTCTACTTTATATATCTCAATTCCACCCCAAAATCCCTCAAAAAGGGCTTTAGAGCCTACCCTTTACTTGGAACATTACCTGATTTCTTGAAGAATCGTCACCGCTTCCTGGATTGGAGCACCCAAGTCCTCCTTGACTGCCCCACCAACACCGCCGTCTTCTTCCGCCCCGGCAAAGTCCAAGGCATCATCACGGCAAACCCAGTCAACGTAGAGTATGTGCTCAAGACCAACTTCCACAACTATCCCAAGGGCGACCGATTCATTAGCCTCCTCGAAGATTTCCTCGGCAGGGGCATCTTCAACTCCGACGGCGACCTCTGGAAGGTTCAGCGAAAAACCGCCAGCTACGAGTTCAACACCAAATCGCTCCGGAACTTTGTGATTGAGAATGTCACGGTCGAAATCCAGTCGAGGTTACTTCCGCTTCTCTCTCGGGCCTCCGAGACCCACCGAGTTTTGGATCTGCAGGACATCTTGGAGCGCTTCGCTTTCGACAACATTTGCAAGCTCGCTTTCAACTTCGACCCTGGATGTCTCGGCGGCGACGGAACAGCAGGAGCGGAATTCATGGCAGCGTTCGAGGACGCCACAACGCTGAGCTCCGGGAGGTTCATGTACGCCTTACCGCACTTGTTTAAAATCAAGAGGTGGTTGAACGTAGGATCAGAGCGGAGGCTGAGAGAATCAATCACAACAGTACACGCGTTCGCGGAAGAGATCATAAGGTCCAGATTGGAAGCCAAGGAAGCTGATCAGGACCAGGACTTACTGTCCCGGTTCATCGTAACGGAAGAGAGTTCCCCCGAGTTTCTGCGAGACATCGTGATAAGCTTTATCCTGGCGGGGCGTGACACGACGTCGTCTGCTCTGAGTTGGTTCTTCTGGATATTATCCTCAAGGCCAGACGTGAAGCGAGAAATAAGAGAAGAAGTCAGAGCAATACGCTACCGAAGCGGGAAGAACGCAGGGGATGCGTTTGGGTATGATGACCTGAAAGAAATGAACCATCTACAAGCAGCAATATCGGAGACAATGAGGTTGTACCCACCCGTACCAATGGACACTAAAGCATGTTTAAGCAACGACGTCTTGCCTGATGGAACGGTGATTGAGAAGAACTGGTTCATATCGTACCATACGTATGCCATGGGAAGGACGGAGAGTATATGGGGAAAGGATTGTTGCGAATTCAAGCCAGAGAGGTGGATTGAGAATGGAGTGTACAGAGGTGAGAGTCCGTTTCGCTATCCAGTGTTCCATGCGGGTCCAAGGTTGTGTTTGGGCAAAGACTTGGCCTATATTCAGATGAAGTACATAGCTGCTTCGGTCATGGAATTGTTCCAGATAGAGGCTCGGAATAAGGACGATTGTCCTCAGCATGTGTTATCTTTGACTTTGAGGATGAAAGGAGGCTTGCCTGTTGTGGTAAGGCAAAGAGATCTCCAATCCTGTGAATCCTGA 1581 0.4984 MYASHLISALGFFSRKCRAMDLFSAPSLLFLFLSLLFFYFYFIYLNSTPKSLKKGFRAYPLLGTLPDFLKNRHRFLDWSTQVLLDCPTNTAVFFRPGKVQGIITANPVNVEYVLKTNFHNYPKGDRFISLLEDFLGRGIFNSDGDLWKVQRKTASYEFNTKSLRNFVIENVTVEIQSRLLPLLSRASETHRVLDLQDILERFAFDNICKLAFNFDPGCLGGDGTAGAEFMAAFEDATTLSSGRFMYALPHLFKIKRWLNVGSERRLRESITTVHAFAEEIIRSRLEAKEADQDQDLLSRFIVTEESSPEFLRDIVISFILAGRDTTSSALSWFFWILSSRPDVKREIREEVRAIRYRSGKNAGDAFGYDDLKEMNHLQAAISETMRLYPPVPMDTKACLSNDVLPDGTVIEKNWFISYHTYAMGRTESIWGKDCCEFKPERWIENGVYRGESPFRYPVFHAGPRLCLGKDLAYIQMKYIAASVMELFQIEARNKDDCPQHVLSLTLRMKGGLPVVVRQRDLQSCES 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2304 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Dere01g2304 526 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 CDD CYP86A 96 512 - -
Dere01g2304 526 PANTHER CYTOCHROME P450 43 514 - -
Dere01g2304 526 SUPERFAMILY Cytochrome P450 46 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 Pfam Cytochrome P450 57 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2304 526 Gene3D Cytochrome P450 46 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2304 Dere-ChrDere01 37295714 37297294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2304 55 519 Cytochrome P450 AT3G56630 62.687 0.0 631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2304 01 37295714 37297294 Dere01g2304 01 37295714 37297294 ECH