Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2303 ATGCAGCTCTTTTCTGTTTTACTCTTATTCTTCCTTTTATTTCTCTACGTCTACCTTCGACTTCTCATTTCCACGCCAAAAGTCGTCAGAAAGGGCTTCAATAACTACCCTTTAATCGGAGCTTTACCGGATTTTGTGAAGAATCGCCACCGTTTTTTGGAGTGGACCACCGAAGTCCTCTGCCGCTGCCCCACCCACTCCGCCTTCTTAGCTCGCCCTGGCAATTTCCTAGGCATCCTTACAGCGAACCCAGACAATGTTGAGCACATTCTCAAGACCAACTTCCATAACTATCCTAAAGGCCACCAAGTGACCGAAGTTCTCCAAGATTTCCTGGGCACCGGAATCTTCAACGCCGACGGCCACCTCTGGAAAGTTCAGAGAAAAACCGCCAGCTACGAATTCAACTCCAAGTCCCTCCGGAATTTCGTCATGGACAATGTCACCGTCGAAATTCAGACCAGACTACTTCCCATTCTCTCGACAGCCTCCGAGACACACCGGGTGCTCGATTTGCAGGACATCTTGGAGCGCTTCGCTTTCAATAACGTTTGCAAGCTTGCTTTCAACGTCGACCCTGGATACCTCGACGGCGACGGAACCACCGGAGCTGACTTCATGCGGGCGTTTGATGACGCCACCACACTCAGCACCGGAAGGTTCCTGTACGCCTTCCTGCTTTTGTATAAAATCAAGAGGTGGTTGAACGTGGGATCAGAGCGAAGGGTGAGAGAATCAATCGCAACCGTGCACGCGTTCGCGGATGAGATCATAAGGTCCAGATTGGAAGCCAAGGAAGCTAATCAGGACCAGGACTTACTGTCCCGGTTTATGGGAACAGAAGAGAGCTCGCCTGAGTTTCTGCGAGATATCGTGATCAGCTTCATCCTGGCAGGGCGCGACACGACGTCGTCGGGGCTGAGCTGGTTCTTCTGGATTCTATCCTCAAGGCCCGACGTCAAACGAGAAATAAGGAAAGAGCTGAAAGCCATTCGCTCCCGAAAAGGCCAAAACATAGGAGCTGCGTTCGGATTCGAGGATCTGAAAGAGATGCATTACCTGCAAGCTGCAATATCGGAAGCGATGAGGTTGTACCCTCCCGTGCCAGTGGATACGAAAGCGTGTCTGAACGACGACGTGTTGCCTGATGGTACGATAATTAAGAAGGACTGGTTTATATCGTATCATACGTACGCCATGGGAAGGATGGTGAGTGTGTGGGGAAAGGATTGCTGCGAATTCAAACCAGAACGATGGATTGAGAATGGAATTTACAAAGGGGAGAACCCGTTTCGCTATCCTGTGTTCCATGCGGGTCCCAGATTGTGTTTGGGGAAGGACTTGGCCTATGTTCAGATGAAGTGCATTGCAGCTTCGGTGTTGGAATTGTATGAGATCGAGGCACAGCATAGGGACAAGTGTCCTGAACATTTATTTTGTTTGACTTTGAGGATGAAAGGGGGCTTGCCCGTCACCGTAACCCGAAGAGATCTCATCAAGCCTTGTTAA 1509 0.501 MQLFSVLLLFFLLFLYVYLRLLISTPKVVRKGFNNYPLIGALPDFVKNRHRFLEWTTEVLCRCPTHSAFLARPGNFLGILTANPDNVEHILKTNFHNYPKGHQVTEVLQDFLGTGIFNADGHLWKVQRKTASYEFNSKSLRNFVMDNVTVEIQTRLLPILSTASETHRVLDLQDILERFAFNNVCKLAFNVDPGYLDGDGTTGADFMRAFDDATTLSTGRFLYAFLLLYKIKRWLNVGSERRVRESIATVHAFADEIIRSRLEAKEANQDQDLLSRFMGTEESSPEFLRDIVISFILAGRDTTSSGLSWFFWILSSRPDVKREIRKELKAIRSRKGQNIGAAFGFEDLKEMHYLQAAISEAMRLYPPVPVDTKACLNDDVLPDGTIIKKDWFISYHTYAMGRMVSVWGKDCCEFKPERWIENGIYKGENPFRYPVFHAGPRLCLGKDLAYVQMKCIAASVLELYEIEAQHRDKCPEHLFCLTLRMKGGLPVTVTRRDLIKPC 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2303 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Dere01g2303 502 PANTHER CYTOCHROME P450 20 491 - -
Dere01g2303 502 Pfam Cytochrome P450 32 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 Gene3D Cytochrome P450 27 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2303 502 CDD CYP86A 73 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2303 Dere-ChrDere01 37279807 37281315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2303 32 496 Cytochrome P450 AT3G56630 59.915 0.0 602