Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2301 ATGAGATATTTTCACTGAGACACTCTGTTTTCTCCGATCTCTCTCTCTCTGTATCCCCTTCTCCAAATGGCTTTACTTCTGATACCAATCTCAATTCTCGCCCTCCTCCTTTGTTTCAAGCTCTATCAGCGGCTCCGCTTCAAGCTTCCACCGGGCCCACGCCCCTGGCCCATCGTCGGCAACCTCTACGACATCAAGCCCGTCAGGTTCCGCTGCTTCGCCGAGTGGGCTCAGTCCTACGGTCCCATCATCTCCGTCTGGTTCGGTTCCACCCTCAACGTCATCGTTTCCAACTCCGAATTGGCCAGAGAGGTGCTCAAGGAGCACGACCAGCAGTTGGCCGACCGGTATCGTAGCCGATCGGCGGCCAGGTTTAGCAGAGACGGCAAGGACCTTATATGGGCCGATTATGGACCTCACTATGTGAAGGTCAGGAAGGTCTGCACGCTGGAGCTTTTCTCGCCCAAGCGCCTCGAGGCCTTGAGACCCATTCGAGAAGATGAGGTTACCGCCATGGTTGAATCCATTTTCAAGGACTCCACGAATCCTGAAAATGAGGGGAAAAGTATACTGATGAAGAAGTACTTGGGAGCAGTGGCATTCAACAACATAACAAGACTAGCGTTTGGGAAAAGATTTGTGAACGCAGAGGGGGTGATAGACGAGCAAGGAGTGGAATTCAAGGCCATCACGGCTAATGGGTTAAAACTTGGAGCATCTCTGGCCATGGCAGAGCATATTCCATGGCTTCGCTGGATGTTCCCACTGGAAGAGGAGGCTTTTGCTAAGCATGGTGCTCGCAGGGACAGACTCACCAGAGCCATCATGGAAGAGCACACTCAGGCTCGCAAGGCTTCCGGTGGTGCCAAGCAACACTTTGTTGACGCCCTCCTCACTTTGCAAGACAAATATGATCTTAGTGAAGACACCATCATTGGTCTTCTCTGGGATATGATCACCGCTGGGATGGACACCACTACGATATCAGTGGAGTGGGCCATGGCTGAGCTTATTAAAAACCCAAGGGTACAGCAAAAGGCCCAAGTGGAACTGGACCGGGTTGTCGGGTTTGAACGGGTCATGACTGAGTCCGACTTCTCGAGCCTTCCTTACCTACAATGTGTGGCCAAGGAGGCCATGCGGCTGCACCCTCCAACCCCACTCATGCTCCCACACAGAGCCAATGCCAATGTCAAGATTGGCGGATATGATATTCCCAAGGGGTCCAACGTCCACGTAAACGTGTGGGCCGTAGCTCGTGACCCGGCTGTCTGGAAGGACCCATTGGAGTTCCGACCCGAGAGGTTTCTGGAGGAGGATGTGGACATGAAGGGCCACGACTACAGGCTATTGCCATTCGGAGCGGGTCGTCGGGTATGCCCGGGTGCACAACTCGGAATCAACCTAGTGACTTCCATGTTGGGTCACCTATTGCACCATTTCCGTTGGACCCCACCGGAAGGAATAAAGCCCGAGGAGATTGACATGTCAGAGAACCCTGGCTTGGTGACCTACATGAGGACCCCACTACAGGCCGTGGCCACTCCAAGGCTCCCCTCGGACTTGTATAAACGCGTGCCTGCCGATATATAA 1593 0.5367 MRYFHXDTLFSPISLSLYPLLQMALLLIPISILALLLCFKLYQRLRFKLPPGPRPWPIVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAREVLKEHDQQLADRYRSRSAARFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTAMVESIFKDSTNPENEGKSILMKKYLGAVAFNNITRLAFGKRFVNAEGVIDEQGVEFKAITANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTQARKASGGAKQHFVDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTTISVEWAMAELIKNPRVQQKAQVELDRVVGFERVMTESDFSSLPYLQCVAKEAMRLHPPTPLMLPHRANANVKIGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDYRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFRWTPPEGIKPEEIDMSENPGLVTYMRTPLQAVATPRLPSDLYKRVPADI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2301 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Dere01g2301 530 FunFam Cytochrome P450 43 521 - -
Dere01g2301 530 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 Pfam Cytochrome P450 50 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 SUPERFAMILY Cytochrome P450 50 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 Gene3D Cytochrome P450 43 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g2301 530 PANTHER CYTOCHROME P450 98A9 27 524 - -
Dere01g2301 530 CDD CYP98 80 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2301 Dere-ChrDere01 37223978 37228014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2301 23 530 Monolignol Biosynthesis Gene Families AT2G40890 81.496 0.0 894