Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2285 ATGGCATCTGATCCATGGGTGAGACAATTTAATGAAGCATCAAAACTAGCTGAAGAAGTCAAGGGAATGATTTCTGCTAAGAGTGCACTGCCCCCATCTGGACCTGAAACACAGCGTCATCTGTCAGCTGCTCGGAGAAAGGTAACCATACTAAGGACCAAAATTGAAATTCTACAGTCACTTCTTGCAAGGCTTCCCGGCCAGCAATCGATAACAGGAAAAGAAATGAATCGACGCCAAGACTTGCTGGTTAATATAAGCTCCAAAGCAAACGAGATGGCTACTACTCTTAACATGTCTCGTCTCGCTAATAGAGATAGCTTGCTAGGCCCTGATAAAAAGTCTGAAGAAGTCATGAAGAAAGCAGCTGGCTTGGACAACCAAGGTCTTGTTGGTTTTCAAAGACAAATTATTAAAGAACAAGATGAAGATCTTGAAAAACTGGAGGAGACAGTTACAAGCACCAAGCACATTGCATTGGCAGTTAATGAGGAACTTAGCCTACATACTAGGCTTTTGGATAATATAGATGAGCATGTGGATACAACAAATTCTTCCCTACAGATGGTACAAAGGAGATTGGCTGTGTTGAACAAGCGCACTAAAGGGGGTTGCTCTTGCTTGATCCTGCTAGTCCTTGTTATCATAATTCTGATAGTTGTTATATGGGCCTTGGTTAAATATTTGTAG 690 0.4174 MASDPWVRQFNEASKLAEEVKGMISAKSALPPSGPETQRHLSAARRKVTILRTKIEILQSLLARLPGQQSITGKEMNRRQDLLVNISSKANEMATTLNMSRLANRDSLLGPDKKSEEVMKKAAGLDNQGLVGFQRQIIKEQDEDLEKLEETVTSTKHIALAVNEELSLHTRLLDNIDEHVDTTNSSLQMVQRRLAVLNKRTKGGCSCLILLVLVIIILIVVIWALVKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2285 229 Pfam SNARE domain 172 223 IPR000727 -
Dere01g2285 229 FunFam syntaxin-51 isoform X2 137 199 - -
Dere01g2285 229 CDD SNARE_Qc 138 195 - -
Dere01g2285 229 Gene3D - 137 199 - -
Dere01g2285 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
Dere01g2285 229 PANTHER SYNTAXIN 22 216 IPR045242 -
Dere01g2285 229 Coils Coil 138 158 - -
Dere01g2285 229 SMART tSNARE_6 130 197 IPR000727 -
Dere01g2285 229 SUPERFAMILY SNARE fusion complex 126 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2285 Dere-ChrDere01 37088078 37093285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2285 2 229 SNARE and Associated Proteins AT1G79590 56.957 2.96e-95 277