Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2274 ATGGGACGGGCTCGGCTGCTTGTTTCAGATTTCATCGTGTCTTTCATGTGGGTATGGTCAGGGGTTCTGATTAAGGTATTTGTCTCCAGATATTTGGGGTTGAGTCATGAGCCCCTTCTTGAGACTGTGAAGGCTACGCTTTCCGTTATAAACATGTTCTTCTTTGCATTCTTGGGAAAATTGACCCATGGCGGCGCCTACAATCCTCTCACCGTTTTGGCCAATGCCATTTCTGGGAATTTTAGCAACTTCCTTTTCTGCGTTGGTGCTAGAATTCCCGCTCAGGTGTTTGGATCTATTACTGGTGTTAGGTTTATAATTGATACATTTCCTGAAGTAGGGCGGGGACCGCGCTTGAACATTGACATTCATGGAGGTGCACTGACAGAAGGATTCCTAACATTTGCAATTGTTATCATCTCACTTGGGCTTGCCTTAAAACTTCCTGGAAGTTTCTATACCAAGACTTGGATTTCCAGCATCTCCAAGCTAACACTTCATATACTTGGCTCTGATCTAACCGGTGGTTGTATGAACCCAGCCTCTGTAATGGGGTGGGCTTACAATCGAGGGGATCACATTACCAAAGAGCACATCCTCGTATACTGGCTTGCCCCCATAGAGGCAACTCTACTGGCAGTGTGGGTATTCAAATTGCTAGTTAAGCCTGCAATAGAAGAGAAAACAGGTACAAAACCTAAATCAGATTGA 711 0.4501 MGRARLLVSDFIVSFMWVWSGVLIKVFVSRYLGLSHEPLLETVKATLSVINMFFFAFLGKLTHGGAYNPLTVLANAISGNFSNFLFCVGARIPAQVFGSITGVRFIIDTFPEVGRGPRLNIDIHGGALTEGFLTFAIVIISLGLALKLPGSFYTKTWISSISKLTLHILGSDLTGGCMNPASVMGWAYNRGDHITKEHILVYWLAPIEATLLAVWVFKLLVKPAIEEKTGTKPKSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2274 236 Pfam Major intrinsic protein 5 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g2274 236 Gene3D Glycerol uptake facilitator protein. 3 232 IPR023271 -
Dere01g2274 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Dere01g2274 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g2274 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g2274 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g2274 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g2274 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g2274 236 SUPERFAMILY Aquaporin-like 4 227 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2274 Dere-ChrDere01 36960327 36962665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2274 1 236 Major Intrinsic Protein MIP AT3G56950 60.759 2.59e-105 303