Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2255 ATGGGCATACTGAATGATATCAGTGCTTTCTTCTTTCCTGTTGCTTTGAGGGCTAATATTCAATGCTATCATGGTATCACAGTGCTACAACACAGTGGGAAAGTAATACAAGAGTATAAAGGTCAATCTGAAAGGGAAATTCATCTCTTGAAGATTGATAAAAGAACACATGCACGTGCATGTCCTCCTCGGTGGGATGCACGCAGGGATTATTATGCATGCATTGCATGTGCCATTGAAGGACTCTGTCTGTTTGAGCCACCAATAGACTGCACTACGTTCAGTTCACTTTTTTCCTGGCTTCTGCATTGGACCAATTTCTCAAATGATAGATATGCCACTGGCTTGTTAATTGGTGGTGTGGCTCAAACAATGGGATCTCAAGGGGAAACAACCCAAGACCCAAAGGCACAATCTTTGGCTAGTCAAGGATCCTCCTTATACAATCTGACCCTTGATGAGGTCCAGAACCAGCTTGGAAATTTAGAGAAGCCTCTGGGCTGCATGAGCCTTGATGAGCTGCTCAAGAGTTTGTGGAATGTAGAAGCTACTAGTCAGGCATGTGCATTGGAATCTAGTCAGCTCACTTCTGGATTGTCTCTGAATCGACATGGCTGCCTGACATTATCTGGGGATCTTAGCAAGAAAACTGTTGATGAGGTTTGGAGAGATATACAACAGCAGAAGTGCACTAATGAAGATAGAAAATCTCAGGAAAGACAGCTTCCACCGAGGGAGATTACCCTTGAGGATTTCTTGGTGAAGGCAGGAGTAATTTCTGATTCAAATGTGGCTTCCCAACAAAATATTTTACAACATGCTCAATGGATGCGATATCAGCACCCTTCACTGCGTGAGCATCAAAATCATCATGATATGATGGCACGTGTTATGACTGATCATGGGGTTCCACGGCCTTTGCCAATGATAGTGAACCCAGTTTTGGATTCATCCTGCTGTGAAACAATGGTGGCAACAATGTCACCATCTTGTTTGATCTCAGATACACATAGTCCAGGAAGGAAAAGGGAGGCCTCTGGTGATCTGGTTGAGAAAACTGTGGAGAGGAAGCAGAAGAGGATGATAAAAAATAGGGAATCTGCGGCTCGGTCACGGGCAAGAAAGCAGGCTTACACACATGAGCTGGAGATTATAGTTTCACATTTAGAAGTGGAGAACGAAAGGCTTAGAAGACAGAATGAGATAGAGAAGGTGTTGCGATGGGCACCACCTGAGCCAAAACATCAGCTTCGCAGAACAAGTTCAGCTCCTTTTTGA 1278 0.4413 MGILNDISAFFFPVALRANIQCYHGITVLQHSGKVIQEYKGQSEREIHLLKIDKRTHARACPPRWDARRDYYACIACAIEGLCLFEPPIDCTTFSSLFSWLLHWTNFSNDRYATGLLIGGVAQTMGSQGETTQDPKAQSLASQGSSLYNLTLDEVQNQLGNLEKPLGCMSLDELLKSLWNVEATSQACALESSQLTSGLSLNRHGCLTLSGDLSKKTVDEVWRDIQQQKCTNEDRKSQERQLPPREITLEDFLVKAGVISDSNVASQQNILQHAQWMRYQHPSLREHQNHHDMMARVMTDHGVPRPLPMIVNPVLDSSCCETMVATMSPSCLISDTHSPGRKREASGDLVEKTVERKQKRMIKNRESAARSRARKQAYTHELEIIVSHLEVENERLRRQNEIEKVLRWAPPEPKHQLRRTSSAPF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2255 425 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 141 424 IPR043452 GO:0003700|GO:0045893
Dere01g2255 425 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 354 406 - -
Dere01g2255 425 CDD bZIP_plant_BZIP46 356 401 - -
Dere01g2255 425 Coils Coil 379 399 - -
Dere01g2255 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 359 374 IPR004827 GO:0003700|GO:0006355
Dere01g2255 425 Gene3D - 354 406 - -
Dere01g2255 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 354 399 IPR004827 GO:0003700|GO:0006355
Dere01g2255 425 SUPERFAMILY Leucine zipper domain 356 401 IPR046347 GO:0003700|GO:0006355
Dere01g2255 425 SMART brlzneu 352 419 IPR004827 GO:0003700|GO:0006355
Dere01g2255 425 Pfam bZIP transcription factor 356 401 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2255 Dere-ChrDere01 36828086 36833538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2255 125 425 bZIP Transcription Factor Family AT3G56850 50.313 3.05e-85 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere01g2255 bZIP_1 3.7e-12 CL0018