Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2248 ATGGATAAGGAGGAGACCTTCATATGCACTGTTCCTATGTTCCATATATACGGTTTACCAGCGTTTGCAACGGGTCTTCTAGTTTCGGGATCAACTATAGTGGTGCTATCCAAGTTCGACATGGACGACATGCTTTCAGCAATCCAGAAGTACCATGCAACGTACCTGTCGCTGGTCCCGCCTATACTTATAGCGATGATAAATAGAGCAGATGCGATAAAGGCGAAGTGCAACTTGAGTTCACTACATTCAGTGCTATCAGGTGGGGCTCCACTAAGCAAGGAGTTGATAGAGGGGTTTGTGGAGAAGTACCATCATATGACAATTCTTCAGGGTTACGGGTTGACCGAATCAATGGGGGTCAGGGCATCCATGGACTCGTTGGAGGAGAGCATGGGGTTAAAAGAGTTCATTAAGTACAAGAGATATCAGGTCCCACTAGCAGAACTTAAGGCCTTGTTGCTTACTCATCCTGCAATTTTTGATGCTGCTGTCATACCATTCCTAGACAATGAGGTTGGGCAATTTCCAATGGCATACGTGAAAGAAAAGCACTCTCGAGCCAAGTTCGTTGTCTTGTTGGTGATAATGATGATGATGGGCAGCAATAGCAGAGACAGAGAAGACGCCCTCACCACGGTTCTGCCACGATAA 654 0.4618 MDKEETFICTVPMFHIYGLPAFATGLLVSGSTIVVLSKFDMDDMLSAIQKYHATYLSLVPPILIAMINRADAIKAKCNLSSLHSVLSGGAPLSKELIEGFVEKYHHMTILQGYGLTESMGVRASMDSLEESMGLKEFIKYKRYQVPLAELKALLLTHPAIFDAAVIPFLDNEVGQFPMAYVKEKHSRAKFVVLLVIMMMMGSNSRDREDALTTVLPR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2248 217 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 134 186 - -
Dere01g2248 217 Pfam AMP-binding enzyme 4 123 IPR000873 -
Dere01g2248 217 SUPERFAMILY Acetyl-CoA synthetase-like 2 184 - -
Dere01g2248 217 Gene3D - 134 213 IPR045851 -
Dere01g2248 217 Gene3D - 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2248 Dere-ChrDere01 36603813 36604466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2248 2 131 Monolignol Biosynthesis Gene Families AT1G20510 71.538 6.46e-60 193