Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2214 ATGAAGCGAGAATTGAGGTTGATTGAAGCTTGTGCTGTGTGGCTTGTGCTCTCGGTGCTACTCAATCCAAACCCGTTGTTATCAGATGCTTCAAGTCACTGTGATTTTCCGGCCATTTTCAACTTCGGAGACTCCAATTCCGACACCGGCGGTCTCTCTGCTGCCTTTGGACAAGCTGGTCCTCCTCACGGAGAGTCCTTCTTCCACCACCCTGCCGGACGCTACTCCGACGGCCGTCTCGTCATTGATTTCATAGCTGGTAAGCTGGGACTACCATATTTGCATGCTTTCCTTGATGCGGTTGGCTCAAATTTTACACATGGAGCCAACTTCGCTACAGCAGGATCCACCATAAGGCCTCAGAATACAACCCTTCGTCAGGTTGGTGGCTTCAGTCCTTTCTCTTTGGATGTTCAGTTCAATCAATTCAGTGATTTCCAACGCCGATCTCAAATTTTTCGCAGTAAAGGAGGAGTTTATAGAGCATTGTTACCAAAAGCACAGGACTTTTCTCGTGCATTATACACTTTCGATATTGGGCAGAATGACTTGGCAGCTGGTTACTTCCACAACATGTCCACGGATCAAGTCAAAGCATATGTTCCTGATGTTTTAGCTCAGTTCAAGAACATTATTAAGTATGTGTATGATCATGGAGGAAGGTCATTCTGGGTACACAATACGGGTCCTGTTGGTTGTTTGCCATACATAATGGAACTCCATCAAGTGAAAGCAGCTAAGGTGGATAAAGCAGGATGTGCCATCCCTTACAATGAAGTTGCTCAATTCTTCAATCGTCAATTAAAAGTAGCTGTGCTTCAACTCAGGAAGAAGCTTCCCTTGGCTGCAATCACCTACGTTGATGTCTACTCGGTCAAGTACTCCCTCATCAGTCAAGCAAAAAAGCATGGTTTTGAGGAACCCCTGAGAGCTTGCTGTGGGCATGGTGGGAAGTACAACTACAATATGCACCTTGGATGTGGAGGGAAGATAAAGGTACGTGGTAAAGAGGTGTTAGTGGGGAAACCATGCAAGGATCCATCGGTTTGGGTTAACTGGGACGGTGTGCACTACACCCAGGCTGCTAATAAATGGGTATTTGAACATATTGTGGATGGATCATTTTCAGATCCACCTATTCCACTGAACAAGGCATGTCATAGGCATCACAACTGA 1176 0.4592 MKRELRLIEACAVWLVLSVLLNPNPLLSDASSHCDFPAIFNFGDSNSDTGGLSAAFGQAGPPHGESFFHHPAGRYSDGRLVIDFIAGKLGLPYLHAFLDAVGSNFTHGANFATAGSTIRPQNTTLRQVGGFSPFSLDVQFNQFSDFQRRSQIFRSKGGVYRALLPKAQDFSRALYTFDIGQNDLAAGYFHNMSTDQVKAYVPDVLAQFKNIIKYVYDHGGRSFWVHNTGPVGCLPYIMELHQVKAAKVDKAGCAIPYNEVAQFFNRQLKVAVLQLRKKLPLAAITYVDVYSVKYSLISQAKKHGFEEPLRACCGHGGKYNYNMHLGCGGKIKVRGKEVLVGKPCKDPSVWVNWDGVHYTQAANKWVFEHIVDGSFSDPPIPLNKACHRHHN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2214 391 FunFam GDSL esterase/lipase At1g09390 27 375 - -
Dere01g2214 391 Gene3D SGNH hydrolase 27 373 IPR036514 -
Dere01g2214 391 SUPERFAMILY SGNH hydrolase 39 371 - -
Dere01g2214 391 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 25 379 - -
Dere01g2214 391 Pfam GDSL-like Lipase/Acylhydrolase 39 370 IPR001087 GO:0016788
Dere01g2214 391 CDD SGNH_plant_lipase_like 37 374 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2214 Dere-ChrDere01 36119387 36122567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2214 37 389 Acyl Lipid Metabolism Gene Families AT4G10950 29.041 2.30e-32 124