Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2201 ATGGAAGATCAAGGCGAGGGGCAACAACAGGAGGCCAATAGCCCAAACCAAGGGTCGGAGAGGAATAGCGAGCCGGTGAGGTCAAGATGGACTCCGAAGCCAGAGCAAATCCTCATCCTCGAGTCCATCTTCAACAGTGGCATGGTGAATCCCCCCAAGGAAGAGACCGTCCGTATCAGAAAGCTGCTCGAGAAGTTCGGCTCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAAAACCGCCGTTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAGGCCTCCCTCGAGCAGCGAAACCAGCTTCAGCCTCAAGTTGGCGGTGCAATTCCCTTCGATCACCCTCACCCTCTCTCCACCTCCTCTACCAATCCACCACCTCCTCCTACTGTTACCACCATGCCTTTTCCTGCTTCGCCCTCTTTCGCTGATCTCTCCGGTTCCTCCTCTTCCTCATGCGGGATGCTTGCGGCCCAAGAAGCCCTCGATGGTCTGTTCACTGTGTCTCCTCAAATGGGTTTCCCTGAGTTTGATCACTCTTCTGCCGCTACTTCTGCTCTATATCCTCCTCATGCTTCCTCCTTCAACTACCATTCTGGACTCATTACAGTCTTCATCAATGGGGTAGCAACAGAAGTTCCAAGGGGACCAATTGACATCAAAACAATGTTTGGGCAAGACGTAGTGTTAGTTCATTCCTCTGGAGTGCTAGTTCCCACCAATGAGTTTGGTTTCTTGATGCAGAACTTGCAGCATGGTGAAAGCTACTTTCTGGTTAGCAAATCTCCAAATTAA 795 0.527 MEDQGEGQQQEANSPNQGSERNSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASLEQRNQLQPQVGGAIPFDHPHPLSTSSTNPPPPPTVTTMPFPASPSFADLSGSSSSSCGMLAAQEALDGLFTVSPQMGFPEFDHSSAATSALYPPHASSFNYHSGLITVFINGVATEVPRGPIDIKTMFGQDVVLVHSSGVLVPTNEFGFLMQNLQHGESYFLVSKSPN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2201 264 SUPERFAMILY Homeodomain-like 23 94 IPR009057 -
Dere01g2201 264 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Dere01g2201 264 SMART HOX_1 25 92 IPR001356 GO:0003677
Dere01g2201 264 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Dere01g2201 264 MobiDBLite consensus disorder prediction 1 32 - -
Dere01g2201 264 FunFam WUSCHEL-related homeobox 11 27 94 - -
Dere01g2201 264 MobiDBLite consensus disorder prediction 86 128 - -
Dere01g2201 264 Gene3D - 27 95 - -
Dere01g2201 264 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 262 IPR044558 GO:0003700|GO:0048830
Dere01g2201 264 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2201 Dere-ChrDere01 36016518 36018235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2201 23 259 Wox Gene Family AT3G03660 53.101 2.22e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere01g2201 Homeodomain 3.2e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2201 01 36016518 36018235 Dere01g2201 01 36016518 36018235 ECH