Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2197 ATGACGATATCAATTGCACTCTGCTTCTTCGTGCTCCTGCTTCCCTTGGCTTTCTCGCAGCTTAAGGGTTGCGATGCGTCCATTCTCATAAACTTCAGTGGGGGTAATGAGACAGAGAAAGAAGCGGGTCAAAACGCGAGCCTTCGAGGGTTTGATCTGATCGATGAGGTGAAGGAGAAGCTGGAAGAAGAATGCCCTTCAACGGTGTCGTGTGCTGACATCATAACGCTTGCCACAAGAGGCGCCGTGGCTCTTTCAGGAGGACCCAAGTACGAGGTTCCCACCGGCAGGCGAGATGGGCTTGTCTCTCTGAAAAGCAAGGTTGATTTGCCAGGGCCTCGTATCTCTGTGCAGGATGCCTTGACATTCTTTGATGGGAAGGGAATCAAGAAAGAAGACATGGTGAGCCTCATGGGAGGACACACGGTGGGAGTTGCAGGAGGTCAACCTCTGGACGCAAAGACACCTGACATTGTGGATAACGAGTTCTATAAGCAGATTCTTCAACAGAGAGGCGTACTGCCCTTGATCGAGAGCTTGCTGTTGCTACGGGGAGTGTAG 561 0.5169 MTISIALCFFVLLLPLAFSQLKGCDASILINFSGGNETEKEAGQNASLRGFDLIDEVKEKLEEECPSTVSCADIITLATRGAVALSGGPKYEVPTGRRDGLVSLKSKVDLPGPRISVQDALTFFDGKGIKKEDMVSLMGGHTVGVAGGQPLDAKTPDIVDNEFYKQILQQRGVLPLIESLLLLRGV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2197 186 Gene3D Peroxidase, domain 2 111 146 - -
Dere01g2197 186 ProSiteProfiles Plant heme peroxidase family profile. 21 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Plant peroxidase signature 68 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Plant peroxidase signature 49 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Plant peroxidase signature 132 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Plant peroxidase signature 87 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Plant peroxidase signature 10 30 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Haem peroxidase superfamily signature 87 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Haem peroxidase superfamily signature 69 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PRINTS Haem peroxidase superfamily signature 133 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 PANTHER PEROXIDASE 25-RELATED 21 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 Pfam Peroxidase 16 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2197 186 Gene3D - 21 110 - -
Dere01g2197 186 ProSitePatterns Peroxidases proximal heme-ligand signature. 133 143 IPR019793 -
Dere01g2197 186 SUPERFAMILY Heme-dependent peroxidases 21 175 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2197 Dere-ChrDere01 35936913 35939138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2197 4 186 Peroxidase AT4G26010 43.256 8.15e-50 162