Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2196 ATGAGTTCAAACATTCAAGTCTTGGCTGAATTCGTATGTTTTGTTGAGACAGAGACAGAATTGCGGTGGCAATCAGGACAAATACCCAGTGACCCGACAATGAAGATATCAATTACGCTCTGCTTCTTCGTGCTCCTGCTTCCCTCGGCTTTCTCGCAGCTTAAGGTTGGATTCTATGGGACTTCATGCCCAAAAGCAGAGTCCATTGTGATGGAAGTGGTGGAGAAGCGATTCAAGGACGACAAGACCATAACCCCAGCCTTGGTTCGCATGCAGTTTCACGACTGTTTTGTCCAAGGTTGCGATGCATCCATTCTTATAAACTCCAGTGGGGGTAATGAGACAGAGAAAGAAGCGGGTCAAAACTTCAGCGTTCGAGGGTTTGACCTGATCGACGAGGTGAAGGAGAAGCTGGAAGAAGAATGCCCTTTAAAGGTGTCGTGTGCTGATATCATAACGCTTGCCACCAGAGACGCCGTGGCTCTGTCAGGGGGACCCAAGTACGAGGTTCCCACCGGAAGGCGAGATGGGGTTGTCTCTCTGAGAAGCAACGTTGATTTGCCATCACCTAGCATCTCTGTGCAGGACGCCTTGAAGTTCTTCGCTAAGAAGGGAATCAGAAAAGAAGACATGGTGAGCCTCATGGGAGGACACACGGTGGGAGTTGCAGGAGGTAGACCTCTGGACGCAAAGACACCCGATATTGTGGATAACGAGTTCTATAACCAGATTCTTCAAAACAGAGGCGTACTGCCCATTGATCAAGAGCTTGCTGTTGCTACGTCCACAAGGGGTTTGGTCACGGCTCTTGCAGGAAACAATACCAAATTTCTAAATAGTTTCGCTGACGCAATGATTAAGATGAGCAAAATTCAAGTTCTGGTTGGTACAGCTGGGGAGATTCGTAAGAATTGCAGTGCTTTTAATAATTAA 933 0.477 MSSNIQVLAEFVCFVETETELRWQSGQIPSDPTMKISITLCFFVLLLPSAFSQLKVGFYGTSCPKAESIVMEVVEKRFKDDKTITPALVRMQFHDCFVQGCDASILINSSGGNETEKEAGQNFSVRGFDLIDEVKEKLEEECPLKVSCADIITLATRDAVALSGGPKYEVPTGRRDGVVSLRSNVDLPSPSISVQDALKFFAKKGIRKEDMVSLMGGHTVGVAGGRPLDAKTPDIVDNEFYNQILQNRGVLPIDQELAVATSTRGLVTALAGNNTKFLNSFADAMIKMSKIQVLVGTAGEIRKNCSAFNN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2196 310 Gene3D - 57 187 - -
Dere01g2196 310 ProSitePatterns Peroxidases active site signature. 85 96 IPR019794 GO:0004601
Dere01g2196 310 Gene3D - 289 309 - -
Dere01g2196 310 FunFam Peroxidase 57 209 - -
Dere01g2196 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Dere01g2196 310 Gene3D Peroxidase, domain 2 188 223 - -
Dere01g2196 310 ProSiteProfiles Plant heme peroxidase family profile. 53 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 Pfam Peroxidase 71 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 SUPERFAMILY Heme-dependent peroxidases 53 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Haem peroxidase superfamily signature 85 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 Gene3D Peroxidase, domain 2 227 288 - -
Dere01g2196 310 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Plant peroxidase signature 63 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Plant peroxidase signature 87 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g2196 310 CDD secretory_peroxidase 53 308 IPR033905 GO:0004601|GO:0042744
Dere01g2196 310 PANTHER - 228 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2196 Dere-ChrDere01 35931982 35933134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2196 37 310 Peroxidase AT4G26010 50.000 2.46e-102 301