Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2189 ATGGATTTCAAAATATTCATGGTTTCCTTCATGCTAACCTCAATATTGTTCTTTGTTCTTTATATTCCCCCCAGATTGACCACACCCATCTCCAGCTTCAGGCCTGTAATGAAATACTTCAATATGCCCCAAACCAGCAAAGCATACCCAGTTTCTTTTGCTTACTTGATCTCCGCATCCAAAGGAGACGCCGTAAAGCTCAAACGGTTGGTGAAGGCGCTGTATCATCCGGGGAATTACTATCTGATTCATATGGATTATGGGGCACCCGAGGCGGAGCTTAGGGATGTGGTTGAGTTTGTGGCCGGAGACCCTGTTTTTGGTGAAGTGGGGAATGTCTGGGTTGTGCGGAAGCGTAATTTAGTCACTTATAGAGGACCAACCATGCTTGCTACCACACTTCATGCTATGGCCATACTTCTCAGGACTTGCCGATGGGATTGGTTTATTAATCTTAGTGCCTCCGATTATCCCTTAGTTACACAAGATGATCTGATCCAAGCATTTTCTGAGGTGCCACGAGATGTCAATTTCGTACAGCATAGCAGTCGCCTGGGTTGGAAGCTGAATAAGAGAGGAAAGCCAATAATTATAGACCCAGGGCTTTACAGCCTCAATAAATCAGAGATTTGGTGGGTCATTAAGCAGAGGAATTTGCCAACATCTTTCAAACTCTACACAGGTTCGGCTTGGACAATATTATCAAGATCATTCGCAGAATTTTGCATTGTGGGGTGGGAAAATTTGCCAAGGACCTTGCTCCTCTACTACACTAACTTCGTGTCAACCCCTGAAGGGTATTTCCAGACAGTAATATGCAATTCTGAAGTGTACAGGAACACCACAGCTAACCATGACCTTCACTACATCACTTGGGATGTTCCTCCAAAGCAACACCCGAGGTCTCTGGGTCTCAAAGATTATCGCAAAATGGTTCTGAGCAGCCGTCCATTTGCCCGAAAATTCAAGAAAAACGATGCTGTTCTGGATAAAATTGATAGAGATCTTCTCAAGAGGCATAATGGGCAGTTTTCTTTTGGAGGATGGTGTTCCAAAGGTGGGAAAAGCAGAGGATGCTCTGATTTCAGAAGTGACAATTATGGTGTTCTGAGCCCTGGCCCTGGCTCTAGGAGGTTAAAAAATTTGCTAACCAAGCTTCTCTCTGATAGATTTTTCTACAGACAGCAATGCAGATAG 1197 0.4428 MDFKIFMVSFMLTSILFFVLYIPPRLTTPISSFRPVMKYFNMPQTSKAYPVSFAYLISASKGDAVKLKRLVKALYHPGNYYLIHMDYGAPEAELRDVVEFVAGDPVFGEVGNVWVVRKRNLVTYRGPTMLATTLHAMAILLRTCRWDWFINLSASDYPLVTQDDLIQAFSEVPRDVNFVQHSSRLGWKLNKRGKPIIIDPGLYSLNKSEIWWVIKQRNLPTSFKLYTGSAWTILSRSFAEFCIVGWENLPRTLLLYYTNFVSTPEGYFQTVICNSEVYRNTTANHDLHYITWDVPPKQHPRSLGLKDYRKMVLSSRPFARKFKKNDAVLDKIDRDLLKRHNGQFSFGGWCSKGGKSRGCSDFRSDNYGVLSPGPGSRRLKNLLTKLLSDRFFYRQQCR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2189 398 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
Dere01g2189 398 PANTHER GLYCOSYLTRANSFERASE 8 397 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2189 Dere-ChrDere01 35845283 35848405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2189 44 398 Glycosyltransferase AT4G27480 56.233 1.14e-149 428