Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2185 ATGGCAACCTTCTACAAACCTCTACCCAGAAAACTCTCACTCTTCCTCAACATATCCTTCCTCTTAATACTCTCTCTCTTTCTTAAATCCTATCTCTTCGCTTCCCATTCAAACTTCCATCATCTATCCAACGGTCCCCCTTCCTCCATCTTCAACCACCGTCCTCGGATCCTCCAAGAAATCAGACTTGATGCCTGCACAGGTCTTCACAATTTCTCAGATTATAGCTCAAAATGCTTGTACGTCAAAACCCATCCTCACTGCAGGTCAAAGGGCTACATAAACTATCTCCAAATCTTTTACTGCAATCTTGGCCAATCCCCAATTATGGGTCATGTTTTGCTTATACTATGGCTTGTGGTGTTGTTCTATCTCTTGGGTGATACAGCTTCTAATTACTTCTGTCACTCCTTAGAAGGTTTGTCCAACATCTTGAGGCTGTCCCCCACCATAGCAGGGGTCACCCTGCTTTCCCTGGGAAACGGAGCTCCTGATTTTTTTGCTAGTGTTGTTTCCTTCACAAGATCCAGCAATGGTGCAGTTGGACTTAACAGCATTCTGGGAGGGGCATTTTTTGTCTCTAGTCCTGTCTTGGGGATTATAAGTATTCTGGTTAGCTCAAACCAGATTGCAGTTGACAAGGCCAGCTTCATTAGAGATGTTCTGTTCTTCCTGTTCTCTTTGTTCGTCCTCCTTGTCATCATTTCCATTGGTAAAATTACCTTGCTGGGTTCAATCTGCTATGTCTCTATCTACTTCCTCTATGTCTGCGCTGTCTCTGCCACACACTTTATCTATGGAGAAGAGAAGAAAGAGAGCGAATTTACCGTATCTACAGATGATTTTGCAGAGTCTGGCATACCATTGCTGGGCTGTGTTGATGATGAGAAACCAAATTTAACGGACAAAGAGGCTATTGAAGACAACAAAGAAAAGCCAGAGTGTTTTGACGGTACTTCATTTACCTGTAATTATTACTTGGGCAAGTTTTTACAAATACTAGAACTACCTCTTAGCTTACCAAGAAGACTAACCATACCAGTTGTGAATGAAGAGAAGTGGTCAAAGCCATATGCAGTTATATCTGTCACATTAGCGCCTGTTTTGCTAGCTGCTATTTGCAACACCCAGAGGGAAAACGTGGATTCTAGGAGCAGTTTGGTTACATACTTAACAGCTGCTTTGATTGGAGTGTTTTTGGGAAATATGGCATGTGTGACCACTAAGAGCTCTAGCCCACCAAGAACGTGCCTGTGTCCTTGGCTAGCAGGAGGATTTACGATGAGTGTGACATGGACATATATTATTGCTGAGGAGCTGGTTTCCCTATTGGTTTCACTTGGGAATATCATTGGGGTTAGTCCTTCCATTCTAGGGTTGACTGTCCTAGCTTGGGGTAACTCGCTTGGGGATTTAATAGCCAATGGTGCTCTGGCTATGAATGGTGGGGCAGATGGGGCCCAGATAGCTATATCTGGGTGCTACGCAGGCCCCATGTTTAATACTTTGATGGGTTTGGGCTTGCCTCTTGTACTCTCAGCATGGTCGGAGTATCCATACCCTTATGTGATTCCCAAAGACCCTTCCCTCTATGAGACTCTCCTGTTCTTAATGGGAGGGTTGTTGTGGGCCCTTGTGGTGTTGCCAAAGAGGAGTATGAGGCTGGACAGGTCCTTGGGAGCTGGACTCTTGATCATATACCTTTGCTTTCTTTTTTTAAGGATAGTAATGGCTATCGGTATTGTGAAATTCTAA 1755 0.441 MATFYKPLPRKLSLFLNISFLLILSLFLKSYLFASHSNFHHLSNGPPSSIFNHRPRILQEIRLDACTGLHNFSDYSSKCLYVKTHPHCRSKGYINYLQIFYCNLGQSPIMGHVLLILWLVVLFYLLGDTASNYFCHSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSSNGAVGLNSILGGAFFVSSPVLGIISILVSSNQIAVDKASFIRDVLFFLFSLFVLLVIISIGKITLLGSICYVSIYFLYVCAVSATHFIYGEEKKESEFTVSTDDFAESGIPLLGCVDDEKPNLTDKEAIEDNKEKPECFDGTSFTCNYYLGKFLQILELPLSLPRRLTIPVVNEEKWSKPYAVISVTLAPVLLAAICNTQRENVDSRSSLVTYLTAALIGVFLGNMACVTTKSSSPPRTCLCPWLAGGFTMSVTWTYIIAEELVSLLVSLGNIIGVSPSILGLTVLAWGNSLGDLIANGALAMNGGADGAQIAISGCYAGPMFNTLMGLGLPLVLSAWSEYPYPYVIPKDPSLYETLLFLMGGLLWALVVLPKRSMRLDRSLGAGLLIIYLCFLFLRIVMAIGIVKF 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2185 584 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 16 582 - -
Dere01g2185 584 Pfam Sodium/calcium exchanger protein 422 575 IPR004837 GO:0016020|GO:0055085
Dere01g2185 584 Pfam Sodium/calcium exchanger protein 117 258 IPR004837 GO:0016020|GO:0055085
Dere01g2185 584 Gene3D - 358 576 IPR044880 -
Dere01g2185 584 Gene3D - 147 278 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2185 Dere-ChrDere01 35831280 35833034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2185 40 583 Antiporters AT5G17860 52.536 0.0 528