Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2175 ATGGCAGAAAAACTCTATCCTTCAATGCTTCTGGTTCTTGGGATACTTTTGCTTGCTATCAATCATTCAGAGCAACTGCAATCTTCCCTGCCCCAGACTCTTCTTAGAATCAAACGGCTTTTGAACTTTCCTGCTGCTTTAAGCAGCTGGAATAGCAACACAGACTTCTGCAGCCCTGAATCAGATTCTTTTCTAACTGTTGTATGCTATGAAGACACCGTAACCCAGCTTCATATAATAGGTGAAAAGAGAGCGCCACTACTTCCTAAAAATTTCTCAATAGATTCCTTTGTCAGCACATTAGCTAGACTTCCCCATTTGAAAGTCCTCACACTGGTTTCTCTTGGCATTTGGGGTCCACTGCCTGGTAAGATTGCTCGATTGTCATCACTGGAAATAGTTATTATGAGTTCAAATTTTCTATATGGTGCCATCCCTCAGGAGCTATCATTTCTTTCAAATCTCCAAACTCTCATCCTTGATGACAACATGTTTTCTGGTGAGCTTCCAGATTGGCTTGATTCTCTTACAGCCTTAACTGTGTTAAGTCTGAAAATTAATCTGTTCAATGGGTCTGTGCCTGATTCGTTGGGTAGATTGGAAAATCTGAGGATTCTTTCACTATCTCACAATCACTTTTATGGAGCAGTACCTGATTTGAGGCGTTTGACAAATCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGTCCTCAGTTTCCTCGACTTAGCACCAAGTTGGTCACTCTTGTACTAAGAAACAATAAATTCAGGTCCGGAGTCCCTGCTGAAGTGACGTCGTTATATCAACTTGAGAGACTTGATATCTCATCAAATTCATTTGTGGGGCCGTTTCATCCTGCATTGCTATCTCTTCCTTCTATTACTTATCTCAACATTTCTGGAAACAAACTCACAGGGATGCTTCTTGAAAATCTAACATGCAGTTCTGAACTGCAAGTTGTGGATTTGTCCTCGAATCTTTTGACTGGCAGCTTATCTACATGTTTACTGTCAAAATCCAACGATAGGACTGTCCTATATGCTGGAAATTGTCTACAAGATATGAATCAGAATCAGCACCTACTGCCCTTTTGTCATACTGAAGCCTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAAAGATGCATCTAAGGTTGGCCTTTCCCTTGGGATTGTGGGTGGGGCTCTTGGAGGAGTAGCGCTTGTTGCCTTGATTTTCTTCGTTATTAAAAGAGGAAATGCCAGGAGCAACATTAAGAATCCTCCAACAAGATTAATATCAGAAAATGCAGCTTCTGGATACACATCTAAGTTTCATTCTGATGCAAGGTACCTATCTCAAACATTGAAGTTGGCAACAGTCGGCCTGCCAAGTTACCGAACTTTCTCTTTGGAAGAGATCGAAGCAGCAACGAACAGCTTTGACACATCTTCTTTCATGGGCGAAAGTTCATATGGACAGATGTACAGAGGCCGGCTGAGGGATGGTTTTCTTGTTGCCATTAAATGCGTGAAAATGAAAAAAGGATGCAGCATTCATAACTTTATGCACCACATAGAACTGATATCAAAACTTAGGCATCGTCATTTAGCCAGTGCTCTTGGACACTGTTTTGAATGTTACTTAGAAGATTCGACTGTCAGCACAATATTTTTTGTCTTCGAATATGTTCCAAATGGCACACTCAAGAGCTGGATCTCTGATAGGCGCTCAAGAAAATCCCTTGGTTGGACCCAACGCATTGAAGCTGCAATTGGAGTAGCAAAGGGTATCCAGTATTTGCATACAGGGATCGTCCCTGGTGTATATTCAAACAATCTCAAAACAACAGATATTTTATTGGATCAGAATCTTGTTGCAAAAATCTGCAGTTATAACCTGCCCTTGTTATCTGACATGGGACAGGTTGAGCACGGAAGTTCTTTCAGTGAATCCAAAAGTTCAAGCGTCAACAAAAGAGTAAAACATGAAGATAAGTCTGATTTATACGACTTTGGAGTAATACTACAAGAAATCATTCTGGGAAGGGCTGCAAGGTCAAGGAACGAAGTGGATGGTTTAAGGGTTCTGTTTCAAGCAAGCATAGTAGGTGACGAGGAATCCAGGAGGAGCATTGTACATGCAGGAGTTCGCAGTTCATGCTTGGATCAATCGTTGAAGACGATGATGGAGATTTGTGCGAGGTGCCTGGTTAAGGAGCCATCAGAAAGGCCTTCCATTGAGGATGTCCTGTGGAATTTGCAGTTTGCAGCTCAAGTTCAGGATGCATGGCGAGGGGAATCTCAAAGCAGTGAAGGGTCTCCAGGCTCACCTTTTGAACCTCGACGACTCACCTTCCATTAG 2352 0.4201 MAEKLYPSMLLVLGILLLAINHSEQLQSSLPQTLLRIKRLLNFPAALSSWNSNTDFCSPESDSFLTVVCYEDTVTQLHIIGEKRAPLLPKNFSIDSFVSTLARLPHLKVLTLVSLGIWGPLPGKIARLSSLEIVIMSSNFLYGAIPQELSFLSNLQTLILDDNMFSGELPDWLDSLTALTVLSLKINLFNGSVPDSLGRLENLRILSLSHNHFYGAVPDLRRLTNLQVLELDDNAFGPQFPRLSTKLVTLVLRNNKFRSGVPAEVTSLYQLERLDISSNSFVGPFHPALLSLPSITYLNISGNKLTGMLLENLTCSSELQVVDLSSNLLTGSLSTCLLSKSNDRTVLYAGNCLQDMNQNQHLLPFCHTEALAVGILPERKKHKDASKVGLSLGIVGGALGGVALVALIFFVIKRGNARSNIKNPPTRLISENAASGYTSKFHSDARYLSQTLKLATVGLPSYRTFSLEEIEAATNSFDTSSFMGESSYGQMYRGRLRDGFLVAIKCVKMKKGCSIHNFMHHIELISKLRHRHLASALGHCFECYLEDSTVSTIFFVFEYVPNGTLKSWISDRRSRKSLGWTQRIEAAIGVAKGIQYLHTGIVPGVYSNNLKTTDILLDQNLVAKICSYNLPLLSDMGQVEHGSSFSESKSSSVNKRVKHEDKSDLYDFGVILQEIILGRAARSRNEVDGLRVLFQASIVGDEESRRSIVHAGVRSSCLDQSLKTMMEICARCLVKEPSERPSIEDVLWNLQFAAQVQDAWRGESQSSEGSPGSPFEPRRLTFH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2175 783 CDD TM_EGFR-like 384 423 - -
Dere01g2175 783 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Dere01g2175 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Dere01g2175 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 766 - -
Dere01g2175 783 SUPERFAMILY Protein kinase-like (PK-like) 457 752 IPR011009 -
Dere01g2175 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Dere01g2175 783 Gene3D Ribonuclease Inhibitor 241 346 IPR032675 -
Dere01g2175 783 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2175 783 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Dere01g2175 783 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Dere01g2175 783 Gene3D Ribonuclease Inhibitor 31 240 IPR032675 -
Dere01g2175 783 Pfam Protein tyrosine and serine/threonine kinase 482 747 IPR001245 GO:0004672|GO:0006468
Dere01g2175 783 SUPERFAMILY L domain-like 33 353 - -
Dere01g2175 783 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 393 762 - -
Dere01g2175 783 Gene3D Transferase(Phosphotransferase) domain 1 561 760 - -
Dere01g2175 783 Gene3D Phosphorylase Kinase; domain 1 449 559 - -
Dere01g2175 783 MobiDBLite consensus disorder prediction 761 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2175 Dere-ChrDere01 35723581 35727275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2175 43 771 Miscellaneous Gene Families AT3G03770 62.943 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Dere01g2175 PK_Tyr_Ser-Thr 3.9e-24 CL0016