Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2162 ATGCAGACGAGGACGGTTCAAGTAAAGAATGTTTCAGATCTAGCCAATGAGCGAGAGATTCATGAATTTTTCTCGTTTTCTGGAGAAATCGATCACATTGAGATCCAGAGTGAAACCGGAAAATCAAAGACAGCATACGTGACATTTAAAGATTCGAAGGCGCTTGAGATTGCATTATTGTTATCGGGGGCAACAATAGTAGATCAGATTGTGAGTATAACGCCAGCAGAGAACTATGTGCCAAAACGTGAGATGCAGGAAGTAAGGGTGGTGGCAAATACTACAAATGTTGCTCCTGCAGAAAATATTTTACCAAACGTTGAGGAGAAAGCAAGCCCCACTAGCAGTGGAAGAATGTATATTAGTAGAGCACAAGATGTAGTTACAACTATGCTGGCAAAAGGTTCAGCAATGAGACAAGAAGCCATGAACAAAGCTAAAGCATTTGATGAAAAGCATCAGTTTACTGCCAATGCATCTGCAAAGGTTGTTTCTTTTGACAAGAAAGTTGGTCTTACAGAGAAATTGACAGTTGGCATATCTGTAGTTAATGAGAAGGTGAAGTATGTAGATCAGAGGCTTCATGTTTCTGATAAAACAATGGCAGCAATGTTGGCAGCTGAGAGGAAGTTGAATGATACTGGATCGGCCGTAAAAACAAGCAGATATGTAACTGCTGGAGCAACATGGTTAAATGGTGCTTTTGGTAAGGTGGCAAGAGCTGGACAACTTGCTGGTACGAAAACTAGAGAGAAGTTTCATTTGGCTGTATCAAACTTGACGGCAAAGGAGCCATCGGTTGCTGCATAA 810 0.4123 MQTRTVQVKNVSDLANEREIHEFFSFSGEIDHIEIQSETGKSKTAYVTFKDSKALEIALLLSGATIVDQIVSITPAENYVPKREMQEVRVVANTTNVAPAENILPNVEEKASPTSSGRMYISRAQDVVTTMLAKGSAMRQEAMNKAKAFDEKHQFTANASAKVVSFDKKVGLTEKLTVGISVVNEKVKYVDQRLHVSDKTMAAMLAAERKLNDTGSAVKTSRYVTAGATWLNGAFGKVARAGQLAGTKTREKFHLAVSNLTAKEPSVAA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2162 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Dere01g2162 269 CDD RRM_Vip1_like 6 74 IPR034360 -
Dere01g2162 269 Gene3D - 1 90 IPR012677 -
Dere01g2162 269 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 254 - -
Dere01g2162 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Dere01g2162 269 SUPERFAMILY RNA-binding domain, RBD 2 85 IPR035979 GO:0003676
Dere01g2162 269 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2162 Dere-ChrDere01 35607592 35611436 Transposed