Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2158 ATGCTTACCATTCACTCTTCTCACACAGTCATACCTTCCGATCCTACACCCACTCCAATACTACCTTCCTCCTTCTGCGAGCAAGTCAAGCTTCCCACTCATGTTCCTCTTCTTTACGTTTACAAAGCCAATACCCATCATCATCTTCATCTTCATCATGCCATTCACACTCTAAAGTCTTCTCTCAGCCAAGCTTTGGTTCCTTACTATCCGCTCGCTGGCAGATTGTGTTGGACGACCCACGTCCGAGGTGGTCGCTGGGAACTCCATTGCAATGGCAGGGGAGTTCAGCTCTATGAAGCTTCTTGTCACTCTCATTTGGATGCTTTGGGTGATTTTGCTCCTACCAACATAGTGCCCCAGCTTATACCCAACATCGATTATGGTTGTCCCATTGAACAAGTCCCTCTGCTTGCAGTGCAGCTCACCAGATTCTCATGTGGCGCTCTCACCGTCGGAGTGACCATGTGTCGCGCTGTGATTGACGGAACAGCTGCCATGCGTTTCGTTAACTCATGGGCCAAGTTGGCCAGAGGAGAGCTTCTAGATCCGACCGAAATGCCACTCCACGATCGAGCAGTGCTGGATTCACGCAGACTTCACACGACACCTCGTTTTGACCATTCCGAGTTTCACCCACCTCCACTATGGGAAGATCGCCCAGGAGAATCACAAGGTCAAACCAAGCACGTAGTTGCCGTTTTGAAGCTCACGAGAGACCAAGTCAACAAACTGAAGAGGAAAAGCAGTGCCTTTGATTCACCGGAACGGCCTTACACTAGTTTCGAGGTGATCGCAGGGCACATGTGGAGGTGCGTGAGCAAGGCACGCTATGCCGGAAATAACGACCAGCCGACGAGGTTGTCAACGTTGGCTAACTGTCGAAACCGTTTGAAACCGCCCCTTCCTGGCGGTTATGCAGGGAATGCAGCTTTTTCAACTGTGACACCGACCTGTTCGTTTAGCGACCTTATGCATAAGCCTCTGAACTATGCAGTAGGGAACGTGAGGAAAGCGCTTGAGAGGCTAACGGATGAGTATGTGAGGTCTGCTCTTGATTATATTGCGAAGGAGAAGGATATGAAGTTATTGAGGCACAACTTCCGCTTCCCTGCAAGGAGCGTTCTGGAAGGAGAATGTATGGGAAACCCCAATCTGATTGTGGTTAGTTGGATGAACTTTTCGTATCGTGAGGCGGATTTTGGGTGGGGGAAACCTGTGTATTTTGGGCCGGGCTTCATGGATTCTGAAGGGAAGGCTTTCGTTATGAATAGTTCTGACGGTGATAGCCTCGTTGTAGCCATTTGTTTGCAAGCACCCCATATGGATGTTTTCAAGAGATATTTCTTCGAGGATATCGAGGAGGTCTTCCATACTTCCAAGTTGTGA 1389 0.4946 MLTIHSSHTVIPSDPTPTPILPSSFCEQVKLPTHVPLLYVYKANTHHHLHLHHAIHTLKSSLSQALVPYYPLAGRLCWTTHVRGGRWELHCNGRGVQLYEASCHSHLDALGDFAPTNIVPQLIPNIDYGCPIEQVPLLAVQLTRFSCGALTVGVTMCRAVIDGTAAMRFVNSWAKLARGELLDPTEMPLHDRAVLDSRRLHTTPRFDHSEFHPPPLWEDRPGESQGQTKHVVAVLKLTRDQVNKLKRKSSAFDSPERPYTSFEVIAGHMWRCVSKARYAGNNDQPTRLSTLANCRNRLKPPLPGGYAGNAAFSTVTPTCSFSDLMHKPLNYAVGNVRKALERLTDEYVRSALDYIAKEKDMKLLRHNFRFPARSVLEGECMGNPNLIVVSWMNFSYREADFGWGKPVYFGPGFMDSEGKAFVMNSSDGDSLVVAICLQAPHMDVFKRYFFEDIEEVFHTSKL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2158 462 Gene3D - 218 451 IPR023213 -
Dere01g2158 462 Gene3D - 1 213 IPR023213 -
Dere01g2158 462 Pfam Transferase family 1 448 - -
Dere01g2158 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2158 Dere-ChrDere01 35559722 35561110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2158 2 451 Monolignol Biosynthesis Gene Families AT5G48930 40.044 3.84e-96 295