Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2147 ATGATATATCACCCACCAAGGGAAAGGGCATTAAGGTTTTGGGAATTAATAATGGATTTGGCAGCGGAGAAGAAACAATTAGATACCAACGACAAGGCGTCCAATGATAACAATAACACTGGTATTCCTCAAGAAAACCAGGATTCTTCGTCTTCATTCGCATCTGACGGTAACAATAACACTGATAAAGAAGCTGAAGAACGACAAGCTCGTGACCTAAAAGCTGGCCTTCATCCCCTAAAGCACAAATTTGTATTTTGGTACACCCGGCGAACACCTGGAGTTCCGAATCAGACATCATATGAGGACAGCATAAAAAAAATTGTCGATTTCAGTACAGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTACTAGCCCTTCTTCTTTGCCAAGTCCAACAGATTTACACCTTTTCAAGGAAGGAATCCGCCCTTTGTGGGAGGACTCTGCTAACTGCAATGGTGGAAAGTGGATTATACGATTCGAAAAGGTTGTGTCAGGTCGTTTTTGGGAGGACTTGGTTCTTGCCTTGGTGGGTAACCAGCTCGATTATGGAGACAACATATGTGGTGCAGTACTAAGCATTCGTTTCAACGAGGATATATTGAGTGTCTGGAATCACAATGCATCCGATCATCAGGCTGTAATGGCTCTGAGAGACTCGATTAAACGCCACTTAAAACTTCCTCATAGCTATGTTACGGAGTACAAGCCCCATGATGCCTCCCTCCGAGATAATGCATCTTACAGAAACACTTGTTTGTTCTTGTCTGAGTCCTTCTATGTAAATGAGGTTGGACCGGCCATGCTTCATTGTATGTTTGAGGCTGCGGGAGAGAAGCATGGTTTTCAGTCAGAACATAGATTGCTATCGTACCGGATATTGATTGATTTTTGA 900 0.43 MIYHPPRERALRFWELIMDLAAEKKQLDTNDKASNDNNNTGIPQENQDSSSSFASDGNNNTDKEAEERQARDLKAGLHPLKHKFVFWYTRRTPGVPNQTSYEDSIKKIVDFSTVEGFWVCYCHLTSPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFEKVVSGRFWEDLVLALVGNQLDYGDNICGAVLSIRFNEDILSVWNHNASDHQAVMALRDSIKRHLKLPHSYVTEYKPHDASLRDNASYRNTCLFLSESFYVNEVGPAMLHCMFEAAGEKHGFQSEHRLLSYRILIDF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2147 299 ProSitePatterns Eukaryotic initiation factor 4E signature. 135 158 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Dere01g2147 299 MobiDBLite consensus disorder prediction 27 69 - -
Dere01g2147 299 FunFam Eukaryotic translation initiation factor NCBP 49 250 - -
Dere01g2147 299 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 46 245 IPR001040 GO:0003723|GO:0003743|GO:0006413
Dere01g2147 299 MobiDBLite consensus disorder prediction 32 59 - -
Dere01g2147 299 Gene3D RNA Cap, Translation Initiation Factor Eif4e 50 249 IPR023398 -
Dere01g2147 299 Pfam Eukaryotic initiation factor 4E 79 236 IPR001040 GO:0003723|GO:0003743|GO:0006413
Dere01g2147 299 SUPERFAMILY eIF4e-like 55 252 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2147 Dere-ChrDere01 35346431 35349843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2147 61 255 Eukaryotic Initiation Factors Gene Family AT5G18110 80.000 4.60e-117 334