Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2114 ATGCGAGTCCCACACTCCAATCTCCCTCCTGGCTTCAGGTTCCACCCCACAGACGAAGAGCTTATCGTTCACTATCTACGCAAGAAGATCGCCTCTTTACCCCTCCCCGTTTCCATCATTGCCGAGGTCGACATCTACAAGCTCGATCCTTGGGATTTACCAGAGTCAGAGTTATGCTTGACCCTGAAATTGTCTGATTTCCGTGTATCAGGAAAGGCTGCGTTTGGAGAGAAAGAATGGTACTTCTTCAGCCCCAGAGACCGTAAGTACCCAAATGGTGCGAGGCCGAACAGGGCTGCTGCTTCTGGGTACTGGAAGGCTACTGGTACTGACAAGACCATAGTGTCATCTTTGGTTGCTGGAGGACCACCTGAGAATATTGGTGTGAAAAAAGCTCTGGTTTTCTACAAAGGGAGACCCCCAAAGGGCATCAAGACCAATTGGATCATGCACGAGTATCGCCTCCTTGATAACAACAAACCCATTAAGCTCAGAGACACCTCCATGAGGCTGGATGACTGGGTTCTGTGCCGGATATACAAGAAGTCCAAATACGACATGCCGTCGTCATCATCATCTACGACAACAGAGGGTTTAGATCTGCAAGATCAAGCTGAAGACCAGCTTTTCAAAGAAGCCCCTTTGCCAACCTCAACGAGTACTGTCAATCCCCCTCCTCCTCAGAACACCACACTCGCACCTCAGAAGTCTTTGTCCTTCTCCAATCTGCTAGATGCCATGGACTACTCTATGTTGAGCAGCTTCTTATCTGATCAGAACCATTCCAACCCACCTGGGTTCGGATCCACTGCTTCGGGGTTTATTAGCAGTGCCGGTGGGAATACTCTAGATCAGCAATACTCCTCCTGCAACACTCCTCCATTGAACCCTTCGGTCCCAAACCTGGAAAACGGCAGACTCAAACGTGAGCTTTCAAACACAGACGAGGATACGCTATACCCGTCCAAGAAATACGTGACTTCTTGCAGTTTCCCAGAAACCACTAACCAATACGAGAATAACCCGCAATGGAACTTCCTCCTGAGACAGTCATTCTTGAGCCAGCAGTTACTTCTGGGTCCTCATCTTCGATTTCAGGGATAA 1104 0.49 MRVPHSNLPPGFRFHPTDEELIVHYLRKKIASLPLPVSIIAEVDIYKLDPWDLPESELCLTLKLSDFRVSGKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVSSLVAGGPPENIGVKKALVFYKGRPPKGIKTNWIMHEYRLLDNNKPIKLRDTSMRLDDWVLCRIYKKSKYDMPSSSSSTTTEGLDLQDQAEDQLFKEAPLPTSTSTVNPPPPQNTTLAPQKSLSFSNLLDAMDYSMLSSFLSDQNHSNPPGFGSTASGFISSAGGNTLDQQYSSCNTPPLNPSVPNLENGRLKRELSNTDEDTLYPSKKYVTSCSFPETTNQYENNPQWNFLLRQSFLSQQLLLGPHLRFQG 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2114 367 Gene3D NAC domain 17 186 IPR036093 GO:0003677|GO:0006355
Dere01g2114 367 PANTHER NAC TRANSCRIPTION FACTOR 56 8 221 - -
Dere01g2114 367 SUPERFAMILY NAC domain 4 182 IPR036093 GO:0003677|GO:0006355
Dere01g2114 367 Pfam No apical meristem (NAM) protein 9 155 IPR003441 GO:0003677|GO:0006355
Dere01g2114 367 ProSiteProfiles NAC domain profile. 8 182 IPR003441 GO:0003677|GO:0006355
Dere01g2114 367 FunFam NAC transcription factor 56 17 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2114 Dere-ChrDere01 35099095 35100374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2114 4 367 NAC Transcription Factor Family AT3G04070 46.631 8.06e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere01g2114 NAM 4.5e-38 No_clan