Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2104 ATGGGAACCGTATACCAAGAAGCACAGCCTCTGCTTCAAGATTTACAGGTGAAGATCCAGGAAGCCTCTATGGTTTTTCCCTCCAAAAAAACCGAGAGAAAATCCTTGTTCTTGTCCAACATAGACAGAGTCCTAAATTTCGACGTAGAAACTGTTCACTTCTTCGTACCTCATAAGGACTTTCCCCCCAACGTTGTGGCTGAGAGGTTGAAGAAGGCCCTAGCCGATGCTCTAGTGAGTTATGATTTCTTTGCGGGAAGACTAAAGCAGAACTCTGAAACAGGTAGGTTGGAGATAGAGTGCAATGGCGCAGGAGTGGGGTATGTGGTGGCTAAGTGTGAGTGCAAACTGGATGAGATAGGAGACTTGGTGTATCCTAATCCAGCTTTTGGACAGTTGGTTCATAAGAATAAGGATTTCCTTGAACCAGGTGACCACCCACTCTGTGTTGTCCAGCTGACATCCTTCAAGTGTGGTGGCTTCGCGATTGGCTTCTCCACCAGCCACACCACCTTTGACGGCTTGAGCTTCAAGACCTTCTTGGACAACCTCGCCGCTTTGGCCGCTAACAAGCCCTTGCCTGTCACCCCCTGCCACGACAGGCAACTCCTGGCCGCTCGATCCCCTCCACGTGTCAGCTTTTCTCACCCCGAGTTGCTCAAGCTCGGCGATAACCTCCCCGACCCAGACCCTCACTCCGGCGTCTTCCAAGCCTCCTCCGAGGAACTCGACTTCAAGATCTTCCGGCTAACCTCCCACGACATCTCCGCCCTCAAGGAAAAGGCCAGGTCCGCCGACGACTGCCCCACCGCCGCTCGTATCAGCAGCTTCAACGTGGTCACCGCCCATGTGTGGAGGTGCAAGGCGTTATCTGCGGCCGGCGACCTCAACAGGTTATCGACCATACTTTACGCGGTGGACATACGGGCGAGGCTGAACCCTCCGCTGCCGAAGTCATACGCGGGGAACGCAGTGTTGACGGCGTATGCGACGGCGAGGTGCGAGGAGCTGGAAGAGTGGCCGTTGGGGAAGTTGGTGGAGATGGTGAGAGAGGGAGCGAGGAGGATGACGGACGAGTACGCACGGTCGGCGGTGGACTGGGGAGAGATGTACAGTGGGCTGCCTAACGGGGAGGTGTTGGTGTCGTCGTGGTGGAGATTAGGGTTTGCGGAGGTGGAGTATCCATGGGGGAAGCCAAGGTATAGTTGTCCAGTGGTGTATCGCAGGAGGGATATCATACTCTTGTTTCCACCCATTGAAGAAGATGATGGGGTCAATGTTTTGGTAGCTTTACCTCCTAAAGAAATGGACAAGTTCCACCGCCTCTTCCATAAGTTCTTAAATTTTCCAGATTGA 1356 0.5376 MGTVYQEAQPLLQDLQVKIQEASMVFPSKKTERKSLFLSNIDRVLNFDVETVHFFVPHKDFPPNVVAERLKKALADALVSYDFFAGRLKQNSETGRLEIECNGAGVGYVVAKCECKLDEIGDLVYPNPAFGQLVHKNKDFLEPGDHPLCVVQLTSFKCGGFAIGFSTSHTTFDGLSFKTFLDNLAALAANKPLPVTPCHDRQLLAARSPPRVSFSHPELLKLGDNLPDPDPHSGVFQASSEELDFKIFRLTSHDISALKEKARSADDCPTAARISSFNVVTAHVWRCKALSAAGDLNRLSTILYAVDIRARLNPPLPKSYAGNAVLTAYATARCEELEEWPLGKLVEMVREGARRMTDEYARSAVDWGEMYSGLPNGEVLVSSWWRLGFAEVEYPWGKPRYSCPVVYRRRDIILLFPPIEEDDGVNVLVALPPKEMDKFHRLFHKFLNFPD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2104 451 Pfam Transferase family 16 441 - -
Dere01g2104 451 Gene3D - 11 220 IPR023213 -
Dere01g2104 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 442 - -
Dere01g2104 451 Gene3D - 229 446 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2104 Dere-ChrDere01 34983960 34986352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2104 15 447 Monolignol Biosynthesis Gene Families AT5G48930 33.705 1.79e-60 201