Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2071 ATGTCAGCGACTCTTGCAGCAATAGTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTTATAGCGCTCATATGGTTTTGCCTATCACAAAGGAGGAGTGTCTTAAGGACTTCAGAGACAGGCTCCTCTGATCCTTCCCAAGTGGGAAGACATGGTGGGATTGAGTTGACATTGCGAGATACTAGGCGGTTTGAGATGGAAGAACTATCTCTGGCCACAAAAAATTTTAGTGACAAAAATTTGATTGGAGAAGGGAAGTTTGGGGAGGTTTATAAAGGTTTACTTCATGATGGTATGCTTGTGGCTATCAAAAAGCGGCATGGACTTCCTAGCCAGGAATTTGTTGATGAGGCACGCTACCTCTCATCCATTCATCATCGGAATCATGTAACTCTTTTGGGCTACTGCCAGGAACAAAGTCTACAGTTTCTTATATACGAATATGTACCTAATGGAAGCGTCTCCAGTCACTTGTATGATGCTGGCCAACAATCACATGAGAAGCTAGAATTCAAGCTTAGACTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTATGAGCCCCCGTTTGGTGCATAAGAATTTCAAAACAGCCAATGTTCTGGTGGATGAAAATTTCATTGCTAAGGTTGCAGATGCAGGACTTCGTAATTTCCTGGGAAGAGCAGATATTGCAGGCCCGTCTTCTCAAGTGGTGGCAAATGAGATATTCCTTGCTCCTGAGGTTAAGGAGTTCAGACGGTTTTCTGAAAAGAGTGATGTATACAGTTTTGGGGTATTTTTGCTGGAACTGTTGAGTGGGAAGGAAGCAACAGAATCACCATTTCCAAACTCTAATCAAAATCTAGTTGAATGGGTGCAAATTGATCAAAACTATCGCAATATGTCCAACATCATTGATCAAAGACTGGGGAGTAGTTTCACAGCTGAAGGCATGGAAGAATTTATCTTGCTGATTGTTCGATGTTTGGATCCTTCAAGCGAGAGGAGACCTTCCATGAGCTATGTTGTAATGGAACTTGATCGGATTCTTGAGAAAGAAATGAACTTGACAACAATCATGGGTGAAGGCACCCCTACTGTGACCCTTGGAAGTCAGTTGTTCCAAGCAACAAGGTAA 1140 0.4316 MSATLAAIVGGAAGAVALVGIVIALIWFCLSQRRSVLRTSETGSSDPSQVGRHGGIELTLRDTRRFEMEELSLATKNFSDKNLIGEGKFGEVYKGLLHDGMLVAIKKRHGLPSQEFVDEARYLSSIHHRNHVTLLGYCQEQSLQFLIYEYVPNGSVSSHLYDAGQQSHEKLEFKLRLSIALGAAKGLAHLHSMSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRADIAGPSSQVVANEIFLAPEVKEFRRFSEKSDVYSFGVFLLELLSGKEATESPFPNSNQNLVEWVQIDQNYRNMSNIIDQRLGSSFTAEGMEEFILLIVRCLDPSSERRPSMSYVVMELDRILEKEMNLTTIMGEGTPTVTLGSQLFQATR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2071 379 Gene3D Phosphorylase Kinase; domain 1 50 150 - -
Dere01g2071 379 FunFam Protein kinase superfamily protein 43 150 - -
Dere01g2071 379 Gene3D Transferase(Phosphotransferase) domain 1 151 364 - -
Dere01g2071 379 SUPERFAMILY Protein kinase-like (PK-like) 59 347 IPR011009 -
Dere01g2071 379 Pfam Protein tyrosine and serine/threonine kinase 82 347 IPR001245 GO:0004672|GO:0006468
Dere01g2071 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Dere01g2071 379 FunFam Protein kinase superfamily protein 151 364 - -
Dere01g2071 379 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2071 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 356 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2071 Dere-ChrDere01 34714624 34717101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2071 66 377 Trihelix Transcription Factor Family AT5G38560 38.318 8.40e-62 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Dere01g2071 PK_Tyr_Ser-Thr 6.1e-42 CL0016