Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2050 ATGGCTCTCTCAGAATCATCAAACCGCCAATCTCTGATCCCAAGCTTCCTCTACTCCTCTTCTTTCTCCGCCAAAACTTTACCTCCCCAGAAGATGCTCAACTCTAGCCCCATCGCTGTCTCTTCTCCGGCTTCGAATCTCGACGGAGGATCGTCCAGGTCCAACTTCATGATTCCGGCTCCAAGTGAGCCTGGCAAGATCGAGATGTACTCGCCTGCCTTCTATGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGACTCACCCACATGGCGGTTACACCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCGAAGTATAAGAGCATCTCGTCTGGATTCGGAGTGTTGCTTAAGGAGCAGGGAGTCAGGGGTTTCTTCAGAGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAATTTGGATTTTACGAGTTCTTTAAGAAGTATTATTCTGATATTGCTGGTCCAGAGTATGCGGCGAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGATGTTGCACTTTGCCCCTTTGAGGCCGTGAAGGTCCGAGTTCAAACTCAGCCGGGTTTTGCTAGAGGTCTGTCTGATGGGCTCCCAAAATTCGTGAAATCTGAAGGAACTTTGGGGCTGTACAAGGGAATAGTTCCTCTGTGGGGACGCCAGATCCCATATACAATGATGAAGTTCGCTTCTTTTGAGACTATTGTTGAGATGATCTATAAGTATGCCATCCCCACGCCAAAGAATGAGTGCAGCAAATCTCTGCAACTTGGTATTAGCTTTGCTGGTGGATATGTTGCTGGTGTATTTTGCGCTATTGTGTCTCATCCTGCTGACAACCTCGTCTCCTTCCTGAACAATGCCAAGGGAGCAACAGTTGGTGACGCTGTGAAGAAGCTTGGTATATGGGGTCTCTTCACCCGTGGACTCCCTCTTCGTATTGTTATGATTGGAACTCTCACTGGAGCACAATGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACCACAGGTGGTGTTGCTCCCGCTGCTCCTCCGGCCTCTCAATTAGCAAAGGCGTAG 1119 0.4897 MALSESSNRQSLIPSFLYSSSFSAKTLPPQKMLNSSPIAVSSPASNLDGGSSRSNFMIPAPSEPGKIEMYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKNECSKSLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGIWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPPASQLAKA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2050 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Dere01g2050 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 53 361 IPR044677 GO:0005315|GO:1990547
Dere01g2050 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Dere01g2050 372 Gene3D Mitochondrial carrier domain 75 351 IPR023395 -
Dere01g2050 372 Pfam Mitochondrial carrier protein 174 258 IPR018108 -
Dere01g2050 372 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Dere01g2050 372 SUPERFAMILY Mitochondrial carrier 76 346 IPR023395 -
Dere01g2050 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Dere01g2050 372 FunFam Phosphate carrier protein, mitochondrial 73 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2050 Dere-ChrDere01 34488119 34491686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2050 6 372 Chloroplast and Mitochondria Gene Families AT5G14040 81.283 0.0 602
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2050 01 34488119 34491686 Dere01g2050 01 34488119 34491686 ECH