Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2031 ATGGAGAAGCAGCTCCCAAGCTTTGTCGTCAATGGAGGCATCAAGTTGCCGATTGGGTACAGGTTCTGCCCCACCGATGAAGAGCTTGTCATTCACTACCTCAAGAGGAAGGCCTTCGCTTATCCATTACCCGCTTCTGTAATCCCTGACTTCGATGTATTCCACACCGAGCCTTGGAGACTCCCAGGTGTCGGTGATTCCAAAGAAAAGAGGTATTTTTTTAGCCGTAGAGGGGACCATGTTCATGGAAACGTTAGCAAGAGAGCTGCTGGCTCTGGATACTGGAAAACCACAGGCAAAGACAAACAAATTATTTCTTCTGAGAACAACCAAGTGGTTGGTATGAGGAGAACTCTGGTTTTCTGTGAAGGGAAACGTTCCCGTGAGACCAGAACTCAGTGGGTCATGCATGAATTAGGCCTTCTTCCCTCTGAAACAGCTTCCTTCCCATTATTTCAGATAGCAGTGGCAGATTGGGCAGTGTATCGCATATTCCAGAAGAGGAAGCTCAAGAGAAAGGGGTCTAATGGGCAACTCTCTAACATAAGGGAAGTTGAGAGAGTAGATGAGATTAAACCCAGTTTCATAGATTTTGCAGTGGAATATGGGAGTGACACAGGTCCTCCCCCACCCAGTTCTCCATGTTTTAGTGAATGCGGTGAAAATTGCTTCTAA 675 0.4667 MEKQLPSFVVNGGIKLPIGYRFCPTDEELVIHYLKRKAFAYPLPASVIPDFDVFHTEPWRLPGVGDSKEKRYFFSRRGDHVHGNVSKRAAGSGYWKTTGKDKQIISSENNQVVGMRRTLVFCEGKRSRETRTQWVMHELGLLPSETASFPLFQIAVADWAVYRIFQKRKLKRKGSNGQLSNIREVERVDEIKPSFIDFAVEYGSDTGPPPPSSPCFSECGENCF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2031 224 Pfam No apical meristem (NAM) protein 17 139 IPR003441 GO:0003677|GO:0006355
Dere01g2031 224 PANTHER NAC TRANSCRIPTION FACTOR 56 16 174 - -
Dere01g2031 224 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Dere01g2031 224 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Dere01g2031 224 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2031 Dere-ChrDere01 34332891 34333877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2031 8 198 NAC Transcription Factor Family AT5G13180 44.019 1.91e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere01g2031 NAM 4.9e-30 No_clan