Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2025 ATGAGGTCTCCTTTCTCGTGCATACCGTGGAGGAAGTCAAAGGCTCTCAAGGAGGGAACTGAGTCCAGGCGACGCAGTCATAGACTGCCTGCCCCTCAAAGAACTTCAGGACAGCGTTCCCAAGCATCTGCACTACGGGAGACTGACTCATCTATCGAGGCCAGGATATTTAGCTACGAAGAGCTTGCAGCTGCAACACAAAATTTTAAGATTGGGTCGTATATAGGGCAAGGTGGATTTGGACCAGTTTACAGAGGCAAGTTAGAGAGCTCGGGTCAGGTCGTAGCCATTAAGAAACTGGATACATCTGGTTCACAAGGAAATAGAGAGTTTTTAGTGGAGGTTCTCATGCTGAATCTTCTACGCCATCCCAACCTTGTCAGTTTGATTGGTTACTGTGCTGAGGGGGTTAATCGGCGTCTCCTTGTATATGAGTACATGCCTCTGGGATCCTTAGAAGCTCGCTTACACGACCTTAAGCCTAATGATGCAGCACTTGATTGGAATACAAGAATGATGATAGCTGCTGAGGCTGCAAGAGGTTTAAATTATCTGCACCGACAGGCAGATCCTCCTCTTATTACTGGACGCAAAGCCCTGGATGATGCCCGTGGCCGTGAAAAGTATCTTCTTGAGTGGGCACGCCCACTGATGAGAGACCGAAGGAAAATCCCAAGATTGGCAGATCCACGGTTGAAAGGTCACTTCTCAGGAACTGCTTTAAGGATGGCGGTTGAATTGGCAGCCATGTGCGTTCGAGAAGAGCCCGGAAACCGGCCTGACTCCAATAATCTGATGCTTGCTCTTGAGTACATAGCCTCCCGCAAATATACTGCAACTGAGCCACAAGGAATAGTAAACACAGGAACTCTGGAGGGTGAAGGTGCGAGCTCTACAAACGAAACATAG 909 0.4862 MRSPFSCIPWRKSKALKEGTESRRRSHRLPAPQRTSGQRSQASALRETDSSIEARIFSYEELAAATQNFKIGSYIGQGGFGPVYRGKLESSGQVVAIKKLDTSGSQGNREFLVEVLMLNLLRHPNLVSLIGYCAEGVNRRLLVYEYMPLGSLEARLHDLKPNDAALDWNTRMMIAAEAARGLNYLHRQADPPLITGRKALDDARGREKYLLEWARPLMRDRRKIPRLADPRLKGHFSGTALRMAVELAAMCVREEPGNRPDSNNLMLALEYIASRKYTATEPQGIVNTGTLEGEGASSTNET 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2025 302 ProSiteProfiles Protein kinase domain profile. 69 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g2025 302 FunFam serine/threonine-protein kinase PBS1-like 35 146 - -
Dere01g2025 302 MobiDBLite consensus disorder prediction 14 28 - -
Dere01g2025 302 PANTHER OS07G0668900 PROTEIN 193 280 - -
Dere01g2025 302 Gene3D Transferase(Phosphotransferase) domain 1 147 193 - -
Dere01g2025 302 MobiDBLite consensus disorder prediction 31 47 - -
Dere01g2025 302 Gene3D Transferase(Phosphotransferase) domain 1 194 288 - -
Dere01g2025 302 Gene3D Phosphorylase Kinase; domain 1 40 146 - -
Dere01g2025 302 SUPERFAMILY Protein kinase-like (PK-like) 55 188 IPR011009 -
Dere01g2025 302 Pfam Protein tyrosine and serine/threonine kinase 70 188 IPR001245 GO:0004672|GO:0006468
Dere01g2025 302 MobiDBLite consensus disorder prediction 11 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2025 Dere-ChrDere01 34305686 34308475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2025 193 274 Glycoside Hydrolase AT3G07070 40.964 3.10e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere01g2025 PK_Tyr_Ser-Thr 3.9e-20 CL0016