Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2015 ATGGAGTCTAATGGCAATTGTTTCCAACTTGACGTAAAACTCAGCGAACCAACTCTAGTTGCTCCTGCGGAGGAAACACAGAAAGGCATGTATTTCCTGTCTAATCTTGATCAGAACATTGCAGTGACTGTCCGAACTGTTTACTGCTTCAAATCGGCTGAGAAGGGAAATGAGAAGGCAGGGGAAGTGATCAAGAATGCCTTGAAGAAGGTTCTTGTCCACTATTACCCACTTGCTGGGAGACTGAACATAAGCAAAGAGGGTAAACTCATAGTGGACTGCACAGGGGAGGGTGCTGTGTTTGTGGAGGCTGAAGCAAATTGCTCAATGGAAGAGATTGGTGACATAACAAAATCCGAACCTGGGACTCTTGGCAAGCTTGTTTATGACATTCCAGGTGCGAAGCACATACTTCAGATGCCTCCTCTGGTTGCCCAGGTGACTAAGTTCAAATGTGGAGGATTTGCTCTTGGGCTGTGCATGAATCACTGTATGTTTGATGGAATTGGTGCTATGGAATTTGTGAACTCTTGGGGTGAAGTAACCAGGGGCCAGCCACTGGCAATCCCCCCATTTCTAGATAGAAGCATACTCAAGGCTCGCAACCCACCTAAGATAGAGTATCTGCACCAAGAATTTGCTGACATCGAAGACAAGTCAGGCTCTAATGAACTATACGAAGATGAGATGGTCTATAGGTCCTTCTGTTTTGATACTGAGAAGCTGAAGCAACTGAAGATGAAAGCGATGGAAGATGGGGTTCTTGAGTCATGCACAACTTTTGAAGTCCTCTCAGCATTCGTATGGATAGCTCGAACCAAAGCGCTAAAACTGTTGCCAGACCAGCAGACAAAGCTACTCTTTGCTGTTGATGGAAGGGCTAAGTTTATCCCTCCTCTACCAAAAGGGTACTGTGGTAATGGGATAGTTCTAACCAATTCTGTTTGTCAAGCAGGTGAGCTATCAGACAAGCCCTTCTCATATGCTGTGAGGCTAATTCAAGATGCTATCAAGATGGTCACAGACAGTTACATGAGATCGGCTATAGATTATTTTGAAGTGACAAGAGCTAGGCCATCTCTGGCTTGCACCCTTCTGATCACAACCTGGTCTAGGCTTTCCTTCCATACCACTGATTTTGGATGGGGAGAACCTGTTCTTTCAGGGCCTGTGTCATTGCCAGAGAAGGAAGTGATTTTGTTCCTATCTCATGGGGTAGAGAGGAAGAACATCAATGTGCTGCTTGGTTTGCCAGCTGCTGCCATGAAGATCTTCCAAGAGAAACGTCATTTTCCTCTAATCATTCTTGATGCAGAAGTAAGAATCTACACAAGACTTTCAATTAATATCTTTACCGCCAAAAAGGAAGATATATCCACTTTGAAAGCAATAGATTATGTCATTTATATTTCTAGCCTGATGACACGTGGATTTCTTGTGCTTCTCTATCTCAAGTTCAGTGGAGGTGGCTTAGTGGGTAAAGTTAGCACAGTTGAGGCTGTCGTGCATCGGTCTTCACTGCCGGACTCTTCATCGATGCTGCCTGGAGATCCTCTTCAACCTTGA 1566 0.4476 MESNGNCFQLDVKLSEPTLVAPAEETQKGMYFLSNLDQNIAVTVRTVYCFKSAEKGNEKAGEVIKNALKKVLVHYYPLAGRLNISKEGKLIVDCTGEGAVFVEAEANCSMEEIGDITKSEPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEVTRGQPLAIPPFLDRSILKARNPPKIEYLHQEFADIEDKSGSNELYEDEMVYRSFCFDTEKLKQLKMKAMEDGVLESCTTFEVLSAFVWIARTKALKLLPDQQTKLLFAVDGRAKFIPPLPKGYCGNGIVLTNSVCQAGELSDKPFSYAVRLIQDAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGVERKNINVLLGLPAAAMKIFQEKRHFPLIILDAEVRIYTRLSINIFTAKKEDISTLKAIDYVIYISSLMTRGFLVLLYLKFSGGGLVGKVSTVEAVVHRSSLPDSSSMLPGDPLQP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2015 521 FunFam Tryptamine hydroxycinnamoyl transferase 217 429 - -
Dere01g2015 521 Gene3D - 214 428 IPR023213 -
Dere01g2015 521 Gene3D - 7 213 IPR023213 -
Dere01g2015 521 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 426 - -
Dere01g2015 521 FunFam Spermidine hydroxycinnamoyl transferase 10 213 - -
Dere01g2015 521 Pfam Transferase family 12 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2015 Dere-ChrDere01 34214727 34217867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2015 10 427 Monolignol Biosynthesis Gene Families AT5G48930 34.873 6.65e-84 265