Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g2011 | ATGTTCTTTACCACGTTACCCACCACTACATTCACATTGCATAGGGGAAAGAAGGAGATGGTCAAAATGTGCAGATGCCATGCATGTTATGCAATAAAAGCAAAAGATGCTAGAAGAACTAAATGGTCCAATGGAATCAAGAAAAGTCTGCAGAGCCGGGCAGTAGCAGCCGGATCAGCAGCCATGGCTCCAAAAAGAGGTGGAAGGACTCCAGCTGTAGCTGCTAAGAAGAAGGCGGATAAGGTGGTGAACCCACTATTCGAGAAGCGTCCGAAGCAGTTTGGGATCGGAGGGGCATTGCCTCCAAAGAGGGACCTAACCAGATTCGTGAAGTGGCCCAAGACCGTTCAGATTCAGAGAAAGAAGAGGATACTGAAGCAAAGGTTAAAGGTCCCACCAGCCTTGAACCAGTTCACCAAAACACTTGACAAGAACCTTGCAACAAGCCTGTTCAAGATGCTCCTTAAGTACAGGCCTGAGGATAAAGCTGAAAAGAAAGAGCGTCTTTTGAAGAGGGCTCAGGCTGAGGCAGAAGGAAAAACTGTCGAAGCTAAGAAGCCAATTGTTGTGAAATACGGTCTTAACCACGTTACATACCTTATTGAGCAGAATAAGGCACAGCTAGTTGTGATTGCCCACGATGTGGACCCTATTGAACTGGTTGTCTGGCTTCCAGCATTGTGCAGGAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAGGCACGACTGGGATCGATTGTCCATAAGAAAACTGCTTCAGTTTTGTGCTTGACAACTGTTAAGAATGAAGACAAATTAGAGTTCTCCAAGATATTGGAGGCTATCAAGGCCAACTTCAACGACAAGTATGATGAGTACAGAAAGAAATGGGGTGGTGGGATCATGGGGTCCAAATCCCAAGCCAGAACCAAAGCCAAGGAAAGACTCCTTGCCAAGGAAGCAGCGCAGAGGATGTCCTAG | 963 | 0.4673 | MFFTTLPTTTFTLHRGKKEMVKMCRCHACYAIKAKDARRTKWSNGIKKSLQSRAVAAGSAAMAPKRGGRTPAVAAKKKADKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMS | 320 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g2011 | 320 | PANTHER | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER | 104 | 296 | - | - | |
Dere01g2011 | 320 | Pfam | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 177 | 267 | IPR004038 | - | |
Dere01g2011 | 320 | Gene3D | - | 112 | 295 | IPR029064 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A/RS6 family signature | 190 | 204 | IPR018492 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A/RS6 family signature | 209 | 222 | IPR018492 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A/RS6 family signature | 225 | 235 | IPR018492 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A/RS6 family signature | 235 | 249 | IPR018492 | - | |
Dere01g2011 | 320 | FunFam | 60S ribosomal protein L7a | 112 | 295 | - | - | |
Dere01g2011 | 320 | Coils | Coil | 163 | 183 | - | - | |
Dere01g2011 | 320 | ProSitePatterns | Ribosomal protein L7Ae signature. | 228 | 245 | IPR004037 | GO:0042254|GO:1990904 | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A family signature | 186 | 206 | IPR001921 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A family signature | 91 | 108 | IPR001921 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A family signature | 128 | 147 | IPR001921 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A family signature | 279 | 299 | IPR001921 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A family signature | 247 | 271 | IPR001921 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A family signature | 152 | 165 | IPR001921 | - | |
Dere01g2011 | 320 | PRINTS | Ribosomal protein L7A family signature | 108 | 125 | IPR001921 | - | |
Dere01g2011 | 320 | SUPERFAMILY | L30e-like | 150 | 291 | IPR029064 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g2011 | Dere-ChrDere01 | 34174850 | 34178523 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g2011 | 62 | 320 | Cytoplasmic Ribosomal Protein Gene Family | AT3G62870 | 84.942 | 1.22e-166 | 462 |