Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2005 ATGGATCCCAAGGGCTCAAAGCAACCACAGGAGGTACCCAGCTTCTTGAGTCTCCCACAGCCACAAGCCAACGTCATGGGAGAGAACAAACCAGCAGAAATCAAGGATTTCCAGATTGCAATTGCGGATAAAGAAGACACTAACAAGAAGCAGTTAGCGCCCAAGAGGAGTTCGAACAAAGACAGACACACCAAAGTCGAAGGCAGAGGAAGGAGGATAAGGATGCCCGCTCTCTGTGCTGCGAGAATCTTCCAGTTGACCAGAGAGTTGGGTCACAAATCTGACGGCGAAACCATTCAGTGGCTTCTCCAGCAGGCGGAGCCGTCGATCATAGCAGCCACCGGAACCGGTACGATTCCCGCATCAGCTTTAGCTGCTGCCGGTGGCTCTGTTTCACAACAGGGGACTTCTCTGTCTGCTGGATTGCATCAGAAAATTGATGAATATGGGGGGTCCAATATTGGGTCGGGCAGTAGGACCGGGTGGGCTATGGTGGGTGGAAATCTGGGGAGACCCCATATGGCCACTGGTCTATGGCCCCCTGTCAGTGGATTCGGGTTTCAGTCGTCATCGGGTCCATCTACGCCAAGTTTAGGAAGTGAGAGTTCAAATTACCTGCAAAAGATTGCGTTCCCTGGGTTTGACTTGCCTGCAGCAGCATCCAACATGGGTGCTATGAGTTTCACCTCAATTTTGGGTGGGAGTAACCAGCAAATGCCTGGGTTGGAGCTGGGGTTGTCTCAAGATGGTCACATCGGGGTTCTGAACCCTCAAGCCTTGTCCCAGATTTATCAGCAGATGGGTCAGGCCAGAGTACACCAGCAGCATCAGCATCAACAGCCTCCTGCTAAGGATGATTCTCAAGGCTCGGGACAGTGA 879 0.5245 MDPKGSKQPQEVPSFLSLPQPQANVMGENKPAEIKDFQIAIADKEDTNKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQQGTSLSAGLHQKIDEYGGSNIGSGSRTGWAMVGGNLGRPHMATGLWPPVSGFGFQSSSGPSTPSLGSESSNYLQKIAFPGFDLPAAASNMGAMSFTSILGGSNQQMPGLELGLSQDGHIGVLNPQALSQIYQQMGQARVHQQHQHQQPPAKDDSQGSGQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2005 292 MobiDBLite consensus disorder prediction 266 292 - -
Dere01g2005 292 MobiDBLite consensus disorder prediction 43 68 - -
Dere01g2005 292 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 140 IPR005333 GO:0003700
Dere01g2005 292 MobiDBLite consensus disorder prediction 10 24 - -
Dere01g2005 292 Pfam TCP family transcription factor 58 143 IPR017887 -
Dere01g2005 292 MobiDBLite consensus disorder prediction 1 25 - -
Dere01g2005 292 ProSiteProfiles TCP domain profile. 59 113 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2005 Dere-ChrDere01 34123191 34124069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2005 1 292 TCP Transcription Factor Family AT3G27010 53.988 5.41e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere01g2005 TCP 9.7e-31 No_clan