Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1996 ATGTTGTTCCCTTGTCCTCCTTCGAGTTATTCCGTTTCCACGAGTGCTATGGGAAGCTCTCTTCATGGTTTGAGCAATTTTGAGGGTCAGAACTCTAGTGGATTCCTGGGTTTGAGGCCTGCCGAAAGTGATCATCAGAAGTTGCAGAAAAGAGGAGATGAAAGCATGGTGATCAGGAGTGAGGAGCAAGGTAGTTCGGGCAAAAAGAAAGGGGAGAAGAAGGTGAGGAAGCCTAGATATGCTTTCCAAACAAGGAGTCAGGTTGATATACTTGACGATGGCTATCGATGGAGAAAATATGGTCAGAAAGCTGTCAAAAACAACAAATTCCCCAGGAGCTACTACAGGTGTACGCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGCCTAACAAAAGACGAGGGCGTAGTGGTGACCACATACGAGGGAGTGCACAACCATCCAATTGAGAAGACCACCGACAACTTCGAGCACATATTGAGTCAGATGCAAATATACACTCCCTTTTAG 513 0.462 MLFPCPPSSYSVSTSAMGSSLHGLSNFEGQNSSGFLGLRPAESDHQKLQKRGDESMVIRSEEQGSSGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHNHPIEKTTDNFEHILSQMQIYTPF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1996 170 SUPERFAMILY WRKY DNA-binding domain 83 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere01g1996 170 MobiDBLite consensus disorder prediction 43 69 - -
Dere01g1996 170 MobiDBLite consensus disorder prediction 7 37 - -
Dere01g1996 170 MobiDBLite consensus disorder prediction 1 79 - -
Dere01g1996 170 Pfam WRKY DNA -binding domain 92 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g1996 170 SMART WRKY_cls 91 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g1996 170 Gene3D WRKY domain 75 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere01g1996 170 ProSiteProfiles WRKY domain profile. 86 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g1996 170 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 153 IPR044810 GO:0003700
Dere01g1996 170 FunFam WRKY transcription factor 57 77 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1996 Dere-ChrDere01 34052886 34054101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1996 79 170 WRKY Transcription Factor Family AT5G13080 88.043 7.60e-59 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere01g1996 WRKY 1.8e-26 CL0274