Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1985 ATGGCGAGTACTGAACAGAAATTGAGCATGGCGATGGATGTGGTGGAGAAACTAGAGTCAGGGTTTCCATACTGGAAAGCCGTCCGTCGCAGGTTCGGCCCAGACTCTCCTTTCTTTGCTTCCGGCAACATCGAACGGGAACTTCTTGCTAAACAGGTTGCCTTGGAATTAACAGCCGAAGAGAAGCAGCAGCTTCAGAATTTGGTGCTAGAAGAAGGCAGGGAAGTCTTTTGTCCTATTGTTAATTGTGGAGCACGCTTGACTTCCTTAGAGGACTTTGAAAATCATTATAATGCACGGCACACTGCCTCTTGTTCAGTGTGTTCTAGAGTCTACCCAACATCTCGCCTGCTCAGCATGCATGTATCTGAAGTGCATGATTCATTCTTTCAGGCTAAGGCTGCTCGTGGCTATGATGTGTATGAATGCTTGGTGGAAGGCTGTGGTTTGAAGTTTAAAAGTTACAAGAGTAGGCAACAGCATCTCATTGACAAGCATAAATTCCCCACTACATTTGAGTTTTTTATGATGGCTCGGCCATCAAAGAAACAGAGGCAGAAGAACCAACGAAAACAAGCTACACACAAGGAGGATGATTCAAAAATGATGGAAGTGGATAATTCAACCATAGATGGCCTTGTGTCGGCAGTCTCTAAATTGAGTACTTCTGATTCCACTCCATCATCTATCAGCTTTGGTCGCCGTCACACTCGGGGTTTGACATTTGTTCCTCGAGCTGTTCAGCGTGAAAGTGGATCAAACTCTGCGTCGCCAAGAACAAAGCAGTAA 789 0.455 MASTEQKLSMAMDVVEKLESGFPYWKAVRRRFGPDSPFFASGNIERELLAKQVALELTAEEKQQLQNLVLEEGREVFCPIVNCGARLTSLEDFENHYNARHTASCSVCSRVYPTSRLLSMHVSEVHDSFFQAKAARGYDVYECLVEGCGLKFKSYKSRQQHLIDKHKFPTTFEFFMMARPSKKQRQKNQRKQATHKEDDSKMMEVDNSTIDGLVSAVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQRESGSNSASPRTKQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1985 262 ProSitePatterns Zinc finger C2H2 type domain signature. 78 101 IPR013087 -
Dere01g1985 262 MobiDBLite consensus disorder prediction 219 262 - -
Dere01g1985 262 ProSitePatterns Zinc finger C2H2 type domain signature. 105 126 IPR013087 -
Dere01g1985 262 SMART c2h2final6 76 101 IPR013087 -
Dere01g1985 262 SMART c2h2final6 141 166 IPR013087 -
Dere01g1985 262 SMART c2h2final6 103 126 IPR013087 -
Dere01g1985 262 MobiDBLite consensus disorder prediction 247 262 - -
Dere01g1985 262 ProSitePatterns Zinc finger C2H2 type domain signature. 143 166 IPR013087 -
Dere01g1985 262 MobiDBLite consensus disorder prediction 191 205 - -
Dere01g1985 262 MobiDBLite consensus disorder prediction 219 235 - -
Dere01g1985 262 PANTHER UNCHARACTERIZED 19 250 IPR039258 -
Dere01g1985 262 MobiDBLite consensus disorder prediction 179 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1985 10 257 C2H2 Transcription Factor Family AT5G14140 66.016 1.75e-122 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere01g1985 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1985 01 33989186 33991405 Dere01g1985 01 33989186 33991405 ECH