Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1965 ATGAATTGTCAAAGAACAATTACCACGGATAAAGATGTAAGCCTGAAATCTAGTCGAGCATCTGGTGGAGATTATGATGCAAAATTAGTTGAAACAATTAACACTGCCATAATAGATAAAAGCCCTTCTGTGAGATGGGAAGATGTTGCTGGTTTAGAAAAGGCAAAGCAAGCTTTAATGAAAATGGTTATTTTGCCAACTAAGAGAAGAGACCTGTTCACTGGTCTTCAAAGGCCCACTAGAGGTTTGCTTCTCTTTGGTCCACCTGGTAATGGAAAAACCATGCTTGCCAAAGCAGTGGCTTCAGAATCAGAAGCAACATTCTTTAACGTATTTGCAGCATTGTTGACATCAAAATGGGTTGGTGAAAGTGAAAAGCTTGTCCGGACTCTATTCATGGTAGCTATTTCCAAGCAACCATATGTGATTTTCATTGATGAGGACATTACCATGAAGATAATATCATTTTCTCAGCAAAGGCCAAGAACTATATGCGTTCTTTTTGCAAATGGAGTCATATCAAGTGTCACACTTCCTGATTCTTCTAAGGGAACATTGACATATGAGGTGCAGCATATTTTGTTTTCCAAATAA 594 0.3822 MNCQRTITTDKDVSLKSSRASGGDYDAKLVETINTAIIDKSPSVRWEDVAGLEKAKQALMKMVILPTKRRDLFTGLQRPTRGLLLFGPPGNGKTMLAKAVASESEATFFNVFAALLTSKWVGESEKLVRTLFMVAISKQPYVIFIDEDITMKIISFSQQRPRTICVLFANGVISSVTLPDSSKGTLTYEVQHILFSK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1965 197 ProSiteProfiles PPC domain profile profile. 133 197 IPR005175 -
Dere01g1965 197 PANTHER AAA DOMAIN-CONTAINING 23 147 - -
Dere01g1965 197 Pfam ATPase family associated with various cellular activities (AAA) 83 147 IPR003959 GO:0005524|GO:0016887
Dere01g1965 197 Gene3D - 42 147 IPR027417 -
Dere01g1965 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 147 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1965 Dere-ChrDere01 33836932 33838215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1965 37 147 Calmodulin-binding Proteins AT3G56690 49.107 1.39e-28 110