Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1956 ATGCCTGTTCGATCGCTAGAACAGATTATATCGAGTTGTGTCGCTCCTCCTGTATCCGTAGCTTCACCTTCGGACTTGCCGCCTCCGTTTTTGTGGACTGAGATGGCTGGAAGTGTTCTTCAACAGTTATTGAGGAGAAAACTTCAGTCCCAATATACTACCCCTTCCCTTTTGTCATCCATTATCACAAAGAAAGATGATGCTGGCTCTGCTGGCAGCAGGTCCTTAAGAGCACTTGCATTAATAGGAGCTGGTGTCTCAGGGTTTTTGAGTTTTGCAACAACTGCATCAGCTGATGAGGCTGAGCATGGCCTGGAATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCCTGCCATTCTATGTCTTTGGTATCATACCGTGATTTGGTTGGTGTTGCTTATACAGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAACGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGCGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTTAGTCTTATAACCAAAGCTCGCCACAATGGTCAAAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGATTGCACTATAACCCTTATTTTCCTGGTGGAGCAATCGCCATGCCTAAAATGCTTAACGATGGTGCTGTTGAATACGAAGATGGTACCCCTGCTACAGAATCTCAGATGGGAAAAGATGTCGTAACTTTCTTAGCTTGGGCAGCTGAACCTGAGATGGAAGAGAGAAAACTGATGGGTTTCAAATGGATTTTTGTACTATCACTGGCACTGCTTCAAGCTGCTTATTTCCGTCGATTGAGGTGGTCAGTTCTGAAGTCTCGCAAGCTGGTTGTTGATGTTGTCAACTAG 1026 0.4571 MPVRSLEQIISSCVAPPVSVASPSDLPPPFLWTEMAGSVLQQLLRRKLQSQYTTPSLLSSIITKKDDAGSAGSRSLRALALIGAGVSGFLSFATTASADEAEHGLECPSYPWPHKGILSSYDHASIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVTFLAWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVVDVVN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1956 341 FunFam Cytochrome c1, heme protein, mitochondrial 297 341 - -
Dere01g1956 341 SUPERFAMILY Cytochrome c 105 295 IPR036909 GO:0009055|GO:0020037
Dere01g1956 341 PANTHER CYTOCHROME C1 65 338 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 296 340 IPR021157 -
Dere01g1956 341 Gene3D - 297 340 - -
Dere01g1956 341 Gene3D - 101 296 IPR036909 GO:0009055|GO:0020037
Dere01g1956 341 ProSiteProfiles Cytochrome c family profile. 124 231 IPR009056 GO:0009055|GO:0020037
Dere01g1956 341 Pfam Cytochrome C1 family 112 328 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 208 232 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 130 149 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 175 195 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 277 296 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 257 276 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 110 129 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 246 257 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 PRINTS Cytochrome C1 signature 296 311 IPR002326 GO:0009055|GO:0020037
Dere01g1956 341 FunFam Cytochrome c1, heme protein 101 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1956 Dere-ChrDere01 33750520 33755949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1956 35 341 Chloroplast and Mitochondria Gene Families AT3G27240 84.790 0.0 502