Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1938 ATGATTTTGGATGATCCTCTTTCCTTAACTTCGAAGAGGAGAAGGGTCATAGCCATTGATTCCATGGATACCGAAGCAGCTAAGGCCAAGCTTGCAGCTATCAAGGAAAGATTTGGACGAGAGATCCATGTATTTGAAACATCAGCACGTTCTCCAGCACCAAATACTGCATCTAACAATGAGGAGACTGATGACTTCTATGAGTTCACCACTGAAGATTATTATCAACTTTTGGCTACTAAGAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGATCAAGAATAACAAAAGCTGTGATTAGAGTTCGCTTTCCTGATAATCACACATTAGAGGCTACCTTTCACCCATCTGAAACAATCCAGAGTTTAGTTGATCTCCTTAACAAAGTGATTACACAACCAGAGCAGCCATTTTATATATATACTACTCCGCCAAAGAAGCTGATCAAAGACCTGTCTCAAGATTTTTATACTGCCGGCTTTTGTCCTGGTGCCATTTTGTACTTTTCATATGATGCTTCCAAAGGTGAACGTGCCATGGCTGACCAAATAGGCCCTTTCCTTAGCGAGGATATCATGTCCTTGAAGGGCTTGGTTTTCACTGACGATCAAGGCCAGCAATCTGAGCCTGTACAGTCTGCCCTAGAACCTGTTGTAGCTACACAAACCCCCGCTGTTGAAGAACGTAAGCCTGCTGATAAAAAGCTTGTTAAACCAAAGTGGCTAAAAATGTGA 762 0.4213 MILDDPLSLTSKRRRVIAIDSMDTEAAKAKLAAIKERFGREIHVFETSARSPAPNTASNNEETDDFYEFTTEDYYQLLATKKEDKFLKTRKIREAEEAARRSRITKAVIRVRFPDNHTLEATFHPSETIQSLVDLLNKVITQPEQPFYIYTTPPKKLIKDLSQDFYTAGFCPGAILYFSYDASKGERAMADQIGPFLSEDIMSLKGLVFTDDQGQQSEPVQSALEPVVATQTPAVEERKPADKKLVKPKWLKM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1938 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 253 IPR044232 GO:0032984|GO:0051117
Dere01g1938 253 CDD UBX2_UBXN9 107 180 - -
Dere01g1938 253 MobiDBLite consensus disorder prediction 231 253 - -
Dere01g1938 253 Pfam UBX domain 105 173 IPR001012 GO:0005515
Dere01g1938 253 Gene3D - 96 179 - -
Dere01g1938 253 ProSiteProfiles UBX domain profile. 102 178 IPR001012 GO:0005515
Dere01g1938 253 SUPERFAMILY Ubiquitin-like 81 178 IPR029071 -
Dere01g1938 253 MobiDBLite consensus disorder prediction 236 253 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1938 36 135 C2H2 Transcription Factor Family AT2G01650 31.731 6.04e-06 45.1