LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g1931	ATGCCCAGCGTAGCTGTGAAGCTCTATAGCGTGTTCTTCAAATTTGTCTTGAAGCAACGTTTGCAGAACAGGATTCAAGCTCCACCCGCTGAATCCAACCCATTCGGAGTCACGTCGCGACCTGATGAATCGGTTGCCGCCTCCAATCCTTCCTTCACTGATGGTATTGCCACCAAGGATATCCATATCGACCCCTTTACATCTGTTACTATAAGAATCTTCCTTCCCGAAACCGCTCTTAGCCCACCAGAACCCCATTCTAGATTCCAACCCCCACCCAAGCGTAGATATAGCGATGGAAAACTCGATCTTGAATCTGGATCTGCACAAGTCGATACGGACAATCGCAATTCAGATTCGTCTCCTTTGCGGCCTAATAATTATGGTGGAAGCAATGGGGTGGGGGGTTCAAATTTGGCCGGCGGTGGAGTGTACAGAGGTTACTCGCCGGCGCTAGATAACCGTCGGAAATTGCCGGTAATGTTGCAGTTTCACGGTGGTGGTTGGGTTAGCGGGAGCAACGATTCTGTTGCGAACGACTTTTTCTGTCGCCGAATTGCCAAACTCTGCGATGTGATTGTTATTGCTGTTGGGTACAGGCTCGCCCCTGAAAGTCGTTATCCGGCAGCTTTTGAGGACGGATTGAAGGTATTGAATTGGTTGGCAAAACAGGCGCACTTAGCTGAATATAGTAAGTCGATGGGGATTGGACGGGGTGGTGGGAGCGAGTTCAAAAAATCAGATGTCCATAGGCATATTGTTGACACGTTTGGAGCTTCAGCGGTTGAACCATGGTTGGCCGCTCATGGTGATCCATCAAGGTGCGTTCTTCTTGGGGTCAGCTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCTGTAGAAGCAGGCAAGCTTCTGGACCCTGTCAAGGTGGTGGCACAAGTCCATATGTATCCATTCTTTGTTGGGAGTGTGCCTACTCATTCTGAAATAAAGTTGGCGAACTCCTACTTTTATGACAAGGCTATGTGTATGCTTGCATGGAAACTATTCCTACCTGAGGAAGAGTTTAGCCTGGACCACCCAGCTGCTAATCCCCTTCTACCAAACCGGGGGCCTCCTCTAAAGCTTATGCCTCCAACACTGACAGTGGTAGCAGAACATGACTGGATGAGGGATCGTGCCATCGCTTACTCAGAGGAGCTCCGAAAGGTAAATGTTGATGCACCTGTGCTTGAGTACAAGGATGCAGTGCATGAATTTGCAACGCTTGATATACTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAATATATTTCACTTCGAGGTTATGAATTCTCATATTGA	1359	0.4857	MPSVAVKLYSVFFKFVLKQRLQNRIQAPPAESNPFGVTSRPDESVAASNPSFTDGIATKDIHIDPFTSVTIRIFLPETALSPPEPHSRFQPPPKRRYSDGKLDLESGSAQVDTDNRNSDSSPLRPNNYGGSNGVGGSNLAGGGVYRGYSPALDNRRKLPVMLQFHGGGWVSGSNDSVANDFFCRRIAKLCDVIVIAVGYRLAPESRYPAAFEDGLKVLNWLAKQAHLAEYSKSMGIGRGGGSEFKKSDVHRHIVDTFGASAVEPWLAAHGDPSRCVLLGVSCGANIADYVARKAVEAGKLLDPVKVVAQVHMYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLLPNRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDILLKSPQAQVCAEDIAIWVKKYISLRGYEFSY	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g1931	452	MobiDBLite	consensus disorder prediction	28	51	-	-
	Dere01g1931	452	MobiDBLite	consensus disorder prediction	80	135	-	-
	Dere01g1931	452	Pfam	alpha/beta hydrolase fold	161	417	IPR013094	GO:0016787
	Dere01g1931	452	SUPERFAMILY	alpha/beta-Hydrolases	144	443	IPR029058	-
	Dere01g1931	452	MobiDBLite	consensus disorder prediction	108	134	-	-
	Dere01g1931	452	PANTHER	ARYLACETAMIDE DEACETYLASE	44	417	-	-
	Dere01g1931	452	Gene3D	alpha/beta hydrolase	35	445	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g1931	Dere-ChrDere01	33498879	33502215	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere01g1931	1	452	Carbohydrate Esterase	AT3G27320	72.588	0.0	664