Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1918 ATGTGCCACAACAACACTCCTCCTCCTCCTTCTCCTCCTTCCGATCTCTCTCACAGTCACACCAACTCTATTCTCAGAACCATAGATTCTCCGAGTCGTCTTACACCGCCTCGCCGGAAGAACAGAACAAAAACCAGGAAGCCCAAGTTCCTGAGTCTCCGCCTACAACTTTCCCCAAACCAATCCAACCCAATGGCCTATCAACAACAGCTCAACCTCTTCCCCTTACACCCAGAAAACTTGATCCATGACAAAGACATCATGCACGACGACCACAACGTCGCTTTCCTCTTCACCTCCCATGGCCCCGCCACCCTCAACGGCCTTCTTGAACAGGACTCCACCACCACCACCACCACCACCACAACCACCGTGTCGGAGGAGGACTCCATGTCGCCGCAGTGTCTGATGGCGTGCCCCTTCGACGAGGAAAACGGGAGCTCGCTGGTCCGGAAAGCCATGAAGAGGAGGAACGAGGAGGAGGAGAGGGATGGAAGGGAGGAGCGGTGGGTATGTTACTCCGAGGTCACTAGCTATTGTAGCGCCACTACGACGGAGAGCACCGCGACCACCACGACGTCGTTTGGGTTGCTGTCCTTGAAGCTGGATTACGAGGGCATATTAAATGCTTGGTCTGATAAAGGTCCTCTGTATGTCCCAGGGGAGACCCCACACGCTGCCCCTGACTTCCGTGACCTTACCCATCACGCTCCCCAAGTTATATGGGGGAATAGTATCAGTGTGGTAGGGACGGGAAGGGAAGATGGAGAAGAAGGAGAAGGAAAGAGGGAGAGGAAGATGAAAGGGAAGGAAGAAATGGGATGGAAGGTGGGGCAAAGAGAGGCAAGCGTGTTAAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTCTCTAAGCGCATCCGCTATGAGGTTCGTAAGCTCAACGCTGAGAAGCGCCCCAGGATGAAGGGACGATTTGTGAAGAGGGACTGA 972 0.5422 MCHNNTPPPPSPPSDLSHSHTNSILRTIDSPSRLTPPRRKNRTKTRKPKFLSLRLQLSPNQSNPMAYQQQLNLFPLHPENLIHDKDIMHDDHNVAFLFTSHGPATLNGLLEQDSTTTTTTTTTTVSEEDSMSPQCLMACPFDEENGSSLVRKAMKRRNEEEERDGREERWVCYSEVTSYCSATTTESTATTTTSFGLLSLKLDYEGILNAWSDKGPLYVPGETPHAAPDFRDLTHHAPQVIWGNSISVVGTGREDGEEGEGKRERKMKGKEEMGWKVGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1918 323 ProSiteProfiles CCT domain profile. 280 322 IPR010402 GO:0005515
Dere01g1918 323 Pfam CCT motif 280 322 IPR010402 GO:0005515
Dere01g1918 323 MobiDBLite consensus disorder prediction 1 15 - -
Dere01g1918 323 MobiDBLite consensus disorder prediction 1 49 - -
Dere01g1918 323 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 323 - -
Dere01g1918 323 MobiDBLite consensus disorder prediction 251 272 - -
Dere01g1918 323 MobiDBLite consensus disorder prediction 16 30 - -
Dere01g1918 323 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1918 Dere-ChrDere01 33404314 33406208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1918 197 322 C2C2-CO-like Transcription Factor Family AT1G25440 45.312 1.30e-22 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere01g1918 CCT 3e-18 CL0281