Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1905 ATGGTTGAGTTTTCGCCCATTATCTTAGCTTTCCTCTGTGGATTGGCCTTAGCTTTGGCTTTGCTTCTGAATTATCTGAGAAAACAGAGGACCCCAAAGAACTTGCCTCATGGAAGCATGGGTTGGCCGTTTTGTGGGGAAACTCTTGGCTTCTTCAAACCCCACGAATCATACTCCTTAGGAAGCTTCTTACAAGAACGTTGTTCTAGGTACGGCAAAGTTTTCAAGTCGCATCTGTTTGGCTCTCCTACCATTGTTTCCTGCGACTACGAGTTCAACATGTTCATTCTTCAGAACGAAGGGAAACTATTCGAGGCTGATTATCCCAAGGTAATGCATTACATTCTCGGAAAGTTATCTCTCATTCTTGTAACAGGCGACCTTCATAAGAAGCTCCGAAGCACTGCTGTAAGATTTGTTTGTGCGGCCAAGTCCCAACCTACTTTCCTTCACTCTGTAGAAATGCTTGTACTCTCAACAGTGAATTCATGGCACAACTGTAAACAAGTTGGTTTCTATGCAGAAGCTAAAAAGTTTACAGTCACTGTTATGCTGAAGCACCTACTGAACATTAATCCGGACGAGCCTCTGGCCTTTAAGATTCTCGAAAACTTCGAGAACTACATGAAGGGTTTCGTTTCATTGCCACTGAATATTCCTGGAACTACATATTCCAATGCTGTGAAGGCTAGAGTAAGACTCTCATCCATTGTCAGAGAAATAATACTAAAAAGGCGTAAAGGTGATGTGGGGTCTGCAGAAAGAGAGGACCTCTTAAATGTGATAATGTCAAAGCCGAACCTATGTGATGAAGAGATAGTGAGCATTGTACTGGACCTCTTGTTTGGGGGTTATGAGACAACTGCAAAACTATTGTCCTTGATTGTCTATTTCCTTGTCCAAGCCCCTAAAGCGTTAGAAAGGCTAAAGGAGGAACACCAAGTCATTAGGAAGAGCAAAATAGAGGGGGAACCACTGAACTGGGAAGACTACAAGCAAATGAAGTTCACTCTAGATGTTATAAATGAAGCAATGAGATGTGGGAATGTAGTCAAATTTTTGCACAGGAAAGCTATTCAAGATTTCAAATTTAAAGAGTTTGTTATACCCGCAGGATGGAAGATTCTTCCTATTTTGTCTGGTGGGCATTTGGATCCCATGTTTTATGAAAATCCTTCGGTGTTCGACCCTTTCAGATGGAAGGACATTTCAACATGCCCGAAAATTACACCATTTGGTGGTGGTCCACGACTCTGTCCAGGGGCTGATATAGCTAAAGTGGAGATAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAGATCAAATCAGATGACTACCCACTTGCTCTTCCTTACGTGGATTTCGCCAGAGGGTTGCTATTGGACCTTGAACAGTTGAACGTTGAAAAAGATTTGTTTTCGAAAAAACCAGAGACAATAAAATGTAAACAAATCTGGGTGTCTTGGGGCGACCAGGATCTAAAAGTATTCCAGAGTGGAATATGA 1515 0.4191 MVEFSPIILAFLCGLALALALLLNYLRKQRTPKNLPHGSMGWPFCGETLGFFKPHESYSLGSFLQERCSRYGKVFKSHLFGSPTIVSCDYEFNMFILQNEGKLFEADYPKVMHYILGKLSLILVTGDLHKKLRSTAVRFVCAAKSQPTFLHSVEMLVLSTVNSWHNCKQVGFYAEAKKFTVTVMLKHLLNINPDEPLAFKILENFENYMKGFVSLPLNIPGTTYSNAVKARVRLSSIVREIILKRRKGDVGSAEREDLLNVIMSKPNLCDEEIVSIVLDLLFGGYETTAKLLSLIVYFLVQAPKALERLKEEHQVIRKSKIEGEPLNWEDYKQMKFTLDVINEAMRCGNVVKFLHRKAIQDFKFKEFVIPAGWKILPILSGGHLDPMFYENPSVFDPFRWKDISTCPKITPFGGGPRLCPGADIAKVEIAFFLHHLVLNYRWKIKSDDYPLALPYVDFARGLLLDLEQLNVEKDLFSKKPETIKCKQIWVSWGDQDLKVFQSGI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1905 504 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 Pfam Cytochrome P450 36 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Dere01g1905 504 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 FunFam Cytochrome P450 724B1 30 467 - -
Dere01g1905 504 Gene3D Cytochrome P450 26 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 CDD CYP90-like 67 467 - -
Dere01g1905 504 SUPERFAMILY Cytochrome P450 29 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1905 504 PANTHER CYTOCHROME P450 26 32 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1905 Dere-ChrDere01 33267371 33269895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1905 40 364 Cytochrome P450 AT5G14400 56.402 1.52e-132 385