Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1894 ATGATAAGACCTCATTGCACCATCATAACCCCAAATTTGCGTAAAATAAAACAAAGTATGGCTCAATTTACAAAGTTTCTGATTCTGCTAGCATTAGCAACAATGGTTGTTGCAAAAGGTTGTGAAGCTCGAATAACACTTATACCTTTAAAGGTGACAGTGCAAATCATCAATAATTTTGCTCCTCCTCAGAACTTAACTCTTCATTGTAAATCGAAAAATGATGATCTTGGAGAGCACACAATCAAAGTTGGAGAAAAGTACGAGTTCAGATTCAGGCCAAGCGTTTTTACTGTTGTATCGTTGTATTTCTGTAGTTTTCAATGGCCATCTGACACTTCGCTTCACTACTTCGACATATACGTCCAGGAACGAGACGAGAATAGATGCATAGAGTCGGATATATCAGTGTGTTCTTGGAAGATATGGAAAGGAGGTGCATGTAAGTATGATTCAGATGTGCAGGCCTATGCTCAGTGTTATCCTTGGAACCCAAAAACTCTTACTTCTATTCCTGTTGCTCTATCTATTACCAATGCTTCTCTTATTTGA 552 0.3804 MIRPHCTIITPNLRKIKQSMAQFTKFLILLALATMVVAKGCEARITLIPLKVTVQIINNFAPPQNLTLHCKSKNDDLGEHTIKVGEKYEFRFRPSVFTVVSLYFCSFQWPSDTSLHYFDIYVQERDENRCIESDISVCSWKIWKGGACKYDSDVQAYAQCYPWNPKTLTSIPVALSITNASLI 183
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1894 183 Pfam Plant self-incompatibility protein S1 53 163 IPR010264 -
Dere01g1894 183 PANTHER - 50 151 IPR010264 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g1894 Dere-ChrDere01 33209627 33210178 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1894 34 168 Carbohydrate Esterase AT3G16970 39.007 3.53e-27 98.6