Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1892 ATGGCTGCAATATTCATGAAGTTTCTGTTACTGCTGCTAACAATGACTTCTGCAACATTGAAGGGAGGCAAGGCATGGTCACTATTTCCTCCAAAAACAACCGTGCAAATCATCAACAATTTTTCTCCACCACAAGATTTGACTCTTCATTGCAAATCCAAAGACGATGATCTTCATGAGCACACTATCAAAGTGGGAGAAATGTACCAGTTCAAATTCAGGCCAAACCCTCTTCTTGATGCGACACTCTTTTTCTGCAGTTTTCGGTGGCCATCAGACCCTTCGCTTCACTACTTTGACATATACGTAGAGGCACGAGATAAGGAGTGCACATTGTGTTCTTGGAAATTATCTCAATTAGGTCTATGCACTTTTGATTGCTATCCTTGGAATTCTCAACCACAATCTGCAGCTACCTCTCTTGGTGTTGCTGCATCAAATGTCAATTCTACACAATTCCATGCATGA 468 0.4145 MAAIFMKFLLLLLTMTSATLKGGKAWSLFPPKTTVQIINNFSPPQDLTLHCKSKDDDLHEHTIKVGEMYQFKFRPNPLLDATLFFCSFRWPSDPSLHYFDIYVEARDKECTLCSWKLSQLGLCTFDCYPWNSQPQSAATSLGVAASNVNSTQFHA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1892 155 Pfam Plant self-incompatibility protein S1 34 126 IPR010264 -
Dere01g1892 155 PANTHER - 29 125 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1892 Dere-ChrDere01 33176883 33179657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1892 31 133 Carbohydrate Esterase AT3G16970 42.241 3.52e-25 92.4